RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
SF1-203ENST00000377387 NANOGP1Q8N7R0 232 aa17.14■□□□□ 0.33
SF1-203ENST00000377387 EFHD2Q96C19 240 aaPredicted RBP17.14■□□□□ 0.33
SF1-203ENST00000377387 TM9SF2Q99805 663 aa17.14■□□□□ 0.33
SF1-203ENST00000377387 EQTNQ9NQ60 294 aa17.14■□□□□ 0.33
SF1-203ENST00000377387 STUB1Q9UNE7 303 aa17.14■□□□□ 0.33
SF1-203ENST00000377387 ZNF232Q9UNY5 417 aa17.14■□□□□ 0.33
SF1-203ENST00000377387 TRPM6Q9BX84 2022 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 A0A1W2PQ09 198 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 A0A1W2PS29 197 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 CH25HO95992 272 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 GNRH1P01148 92 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 LASP1Q14847 261 aaKnown RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 NCF4Q15080 339 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 MFSD4BQ5TF39 518 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 SLC9A6Q92581 669 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 ZBED6CLQ96FA7 236 aaPredicted RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 LRIG1Q96JA1 1093 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 TEFMQ96QE5 360 aaKnown RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 YIPF2Q9BWQ6 316 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 BEX2Q9BXY8 128 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 RACGAP1Q9H0H5 632 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 SEC14L4Q9UDX3 406 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 SSR2P43308 183 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 CLCNKAP51800 687 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 HOXC5Q00444 222 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 DBPQ10586 325 aaPredicted RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 C12orf73Q69YU5 71 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 TYW3Q6IPR3 259 aaKnown RBP17.13■□□□□ 0.33
SF1-203ENST00000377387 OR52I1Q8NGK6 324 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 KLK6Q92876 244 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 SLC35G5Q96KT7 338 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 PLA2G12AQ9BZM1 189 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 DPEP2Q9H4A9 486 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 GLIPR2Q9H4G4 154 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 FZD3Q9NPG1 666 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 MALT1Q9UDY8 824 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 ZNF221Q9UK13 617 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 N6AMT1Q9Y5N5 214 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 V9GYH0 126 aa17.13■□□□□ 0.33
SF1-203ENST00000377387 SCN3AQ9NY46 2000 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 PRR23AA6NEV1 266 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 PDE9AO76083 593 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 TSPAN19P0C672 248 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 PIPP12273 146 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 HTR3AP46098 478 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 NCBP2P52298 156 aaKnown RBP eCLIP17.12■□□□□ 0.334e-14■□□□□ 8.3
SF1-203ENST00000377387 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 SYT14P1Q58G82 188 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 ATAD3CQ5T2N8 411 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 C9orf64Q5T6V5 341 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 ZNF517Q6ZMY9 492 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 TRIM69Q86WT6 500 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 DCUN1D3Q8IWE4 304 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 SLC30A8Q8IWU4 369 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 ZNF557Q8N988 423 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 DIRAS2Q96HU8 199 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 NELL2Q99435 816 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 TRMT61BQ9BVS5 477 aaKnown RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 NEUROD4Q9HD90 331 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 TXNL4BQ9NX01 149 aaKnown RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 HCN2Q9UL51 889 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 A0A1W2PQL4 384 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 NDUFS4O43181 175 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 IDH3BO43837 385 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 TP53P04637 393 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 IL7P13232 177 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 HOXB3P14651 431 aaPredicted RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 SDC2P34741 201 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 RFX2P48378 723 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 GIPRP48546 466 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 CCR8P51685 355 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 PCBP4P57723 403 aaKnown RBP17.12■□□□□ 0.33
SF1-203ENST00000377387 FLYWCH1Q4VC44 716 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 GPAT3Q53EU6 434 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 PDZD3Q86UT5 571 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 CCDC116Q8IYX3 515 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 OR8D1Q8WZ84 308 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 KLHL31Q9H511 634 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 P2RX2Q9UBL9 471 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 IL20RAQ9UHF4 553 aa17.12■□□□□ 0.33
SF1-203ENST00000377387 A0A075B6Q4 140 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 ARRDC5A6NEK1 342 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 ZNF670-ZNF695F2Z2N8 137 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 ETV6P41212 452 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 MRPS15P82914 257 aaKnown RBP17.11■□□□□ 0.33
SF1-203ENST00000377387 LARS2Q15031 903 aaKnown RBP17.11■□□□□ 0.33
SF1-203ENST00000377387 NDUFAF5Q5TEU4 345 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 C16orf58Q96GQ5 468 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 BBS4Q96RK4 519 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 CCDC32Q9BV29 185 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 CNIH4Q9P003 139 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 CMAHPQ9Y471 501 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 OR1A2Q9Y585 309 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 KCNE3Q9Y6H6 103 aa17.11■□□□□ 0.33
SF1-203ENST00000377387 DNMT3AQ9Y6K1 912 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms