RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 EXTL2Q9UBQ6 330 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 TOXO94900 526 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CELP19835 753 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 PTPRRQ15256 657 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 GHRLQ9UBU3 117 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 D6RAR5 112 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 SOCS2O14508 198 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 HOXA9P31269 272 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM205Q6UW68 189 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 RNF111Q6ZNA4 994 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF619Q8N2I2 560 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 REEP4Q9H6H4 257 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 STUB1Q9UNE7 303 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 LIPT1Q9Y234 373 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 H0YAE9 185 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 PHYHO14832 338 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 C12orf45Q8N5I9 185 aaPredicted RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 THAP3Q8WTV1 239 aaPredicted RBP11.95□□□□□ -0.5
VPS13A-204ENST00000376634 IRF7Q92985 503 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 PCDHAC2Q9Y5I4 1007 aa11.95□□□□□ -0.5
VPS13A-204ENST00000376634 CD8B2A6NJW9 211 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 CD8BP10966 210 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 CKMT2P17540 419 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 RHCEP18577 417 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 RAB41Q5JT25 222 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PDZD9Q8IXQ8 264 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 HRASLS2Q9NWW9 162 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 GRPRP30550 384 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SNU13P55769 128 aaKnown RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 GPR149Q86SP6 731 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 COMMD7Q86VX2 200 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 LRRC25Q8N386 305 aaPredicted RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 MYRFLQ96LU7 910 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF382Q96SR6 550 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PKP2Q99959 881 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PAPOLGQ9BWT3 736 aaKnown RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ART1P52961 327 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PPP5CP53041 499 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 LIPJQ5W064 366 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 RDH12Q96NR8 316 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 MCHR1Q99705 422 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ADAMTS10Q9H324 1103 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 NSUN3Q9H649 340 aaKnown RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 COL20A1Q9P218 1284 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TBX10O75333 385 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TNFSF4P23510 183 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 LSSP48449 732 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 MEP1AQ16819 746 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 FGFBP2Q9BYJ0 223 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 OR2S2Q9NQN1 319 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TP53TG5Q9Y2B4 290 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 CYB5BO43169 146 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PAK4O96013 591 aaPredicted RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PNMTP11086 282 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 HRH2P25021 359 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SRYQ05066 204 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 PLEKHS1Q5SXH7 462 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF610Q8N9Z0 462 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TERB2Q8NHR7 220 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ZFP57Q9NU63 452 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 A8MXE2 369 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SOX30O94993 753 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 DUSP3P51452 185 aaPredicted RBP11.94□□□□□ -0.5
VPS13A-204ENST00000376634 IL22RA1Q8N6P7 574 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 DEFB126Q9BYW3 111 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 CACNG4Q9UBN1 327 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 IL20RAQ9UHF4 553 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF440Q8IYI8 595 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SLC41A3Q96GZ6 507 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 OR52B2Q96RD2 323 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 FOXN2P32314 431 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 SLC18A1P54219 525 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TIGD5Q53EQ6 642 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM107Q6UX40 140 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 ARL11Q969Q4 196 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 KIAA2026Q5HYC2 2103 aa11.94□□□□□ -0.5
VPS13A-204ENST00000376634 HTD2P86397 168 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 RAB30Q15771 203 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 FAM214AQ32MH5 1076 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 UBE2UQ5VVX9 321 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TXNDC8Q6A555 127 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM151BQ8IW70 566 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 PELOQ9BRX2 385 aaKnown RBP11.93□□□□□ -0.5
VPS13A-204ENST00000376634 MAS1P04201 325 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 EBLN1P0CF75 366 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 S100A7P31151 101 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 RFC2P35250 354 aa11.93□□□□□ -0.5
VPS13A-204ENST00000376634 DNAJB13P59910 316 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms