RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 GIPRP48546 466 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 TAP2Q03519 686 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 STX4Q12846 297 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PRAMEF9Q5VWM5 478 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 FAM124AQ86V42 546 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 LRRTM4Q86VH4 590 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 RBM45Q8IUH3 476 aaKnown RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PGBD3Q8N328 593 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ALG14Q96F25 216 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ZNF354BQ96LW1 612 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 RC3H2Q9HBD1 1191 aaKnown RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PCDHGA3Q9Y5H0 932 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 SBF1O95248 1867 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 A0A075B6Q4 140 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 FGF18O76093 207 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 LAMP2P13473 410 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 GRK5P34947 590 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 MPIP34949 423 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ADAM15Q13444 863 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 DSG2Q14126 1118 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 TRAM2Q15035 370 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 CDCA4Q9BXL8 241 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 BTBD1Q9H0C5 482 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 CALML5Q9NZT1 146 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 EXTL2Q9UBQ6 330 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 FOXE1O00358 373 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 FRS3O43559 492 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ZNF24P17028 368 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PTPN6P29350 595 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 TLX1P31314 330 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 TGM4P49221 684 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ILKQ13418 452 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 FAM129CQ86XR2 697 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 MCCC1Q96RQ3 725 aaPredicted RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 CNIH4Q9P003 139 aa12.47□□□□□ -0.41
CUL4A-203ENST00000375441 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
CUL4A-203ENST00000375441 HMGN1P05114 100 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 ACADMP11310 421 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 CTNNB1P35222 781 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 SLC7A9P82251 487 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 CNIH2Q6PI25 160 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 OLIG3Q7RTU3 272 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 CDH24Q86UP0 819 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 UXS1Q8NBZ7 420 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 RPS6KB2Q9UBS0 482 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 CCL26Q9Y258 94 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 TRBV23OR9-2A0A075B6M9 112 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 CARNS1A5YM72 827 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 ZNF670-ZNF695F2Z2N8 137 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 OR2B3O76000 313 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 TMEM44Q2T9K0 475 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 KLBQ86Z14 1044 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 SRFBP1Q8NEF9 429 aaKnown RBP12.46□□□□□ -0.41
CUL4A-203ENST00000375441 ANKK1Q8NFD2 765 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 TREX2Q9BQ50 279 aaPredicted RBP12.46□□□□□ -0.41
CUL4A-203ENST00000375441 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.41
CUL4A-203ENST00000375441 TXNL4BQ9NX01 149 aaKnown RBP12.46□□□□□ -0.41
CUL4A-203ENST00000375441 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
CUL4A-203ENST00000375441 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
CUL4A-203ENST00000375441 TRIM64BA6NI03 449 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 ZAR1LA6NP61 321 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 SCN2BO60939 215 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 OR5F1O95221 314 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 SLC3A1Q07837 685 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 FAM214AQ32MH5 1076 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 ZMAT1Q5H9K5 638 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 FAM71E1Q6IPT2 247 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 TMEM145Q8NBT3 493 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 BBS10Q8TAM1 723 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 FAM46AQ96IP4 442 aaKnown RBP12.46□□□□□ -0.42
CUL4A-203ENST00000375441 SNX18Q96RF0 628 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 MCHR1Q99705 422 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 TPD52L2O43399 206 aaKnown RBP12.46□□□□□ -0.42
CUL4A-203ENST00000375441 C6P13671 934 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.42
CUL4A-203ENST00000375441 HTR2BP41595 481 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 MAN2A2P49641 1150 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 DCDC1P59894 354 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.42
CUL4A-203ENST00000375441 GPR68Q15743 365 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 IFT27Q9BW83 186 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.42
CUL4A-203ENST00000375441 TRAV6A0A075B6T7 132 aa12.45□□□□□ -0.42
CUL4A-203ENST00000375441 C2orf92A0A1B0GVN3 265 aa12.45□□□□□ -0.42
CUL4A-203ENST00000375441 SSX4O60224 188 aa12.45□□□□□ -0.42
CUL4A-203ENST00000375441 IL1AP01583 271 aa12.45□□□□□ -0.42
CUL4A-203ENST00000375441 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
CUL4A-203ENST00000375441 HSD17B2P37059 387 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms