RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ZFP57Q9NU63 452 aa11.02□□□□□ -0.64
VCL-202ENST00000372755 ACOT7O00154 380 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 P04436 131 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 DNASE1P24855 282 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 KDELR2P33947 212 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 POU3F4P49335 361 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 MAMDC2Q7Z304 686 aaPredicted RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 CCDC28AQ8IWP9 274 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 MS4A15Q8N5U1 240 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PLEKHA3Q9HB20 300 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 OR2S2Q9NQN1 319 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 TAS2R8Q9NYW2 309 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 hCG_1807616A0A1W2PRN6 198 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SDHDO14521 159 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 CREBL2O60519 120 aaPredicted RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 SNAP29O95721 258 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 IL7P13232 177 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 RPS15P62841 145 aaKnown RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 PSPHP78330 225 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 KIAA0895LQ68EN5 471 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 HMBOX1Q6NT76 420 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 MTFR2Q6P444 385 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 HACD2Q6Y1H2 254 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 TRIM46Q7Z4K8 759 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PLD6Q8N2A8 252 aaKnown RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 ENDOVQ8N8Q3 282 aaKnown RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 WDR20Q8TBZ3 569 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SLC2A13Q96QE2 648 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PITX2Q99697 317 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 NCDNQ9UBB6 729 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 GPR37L1O60883 481 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 HBQ1P09105 142 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 MSX1P28360 303 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 OR2T4Q8NH00 348 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PPLO60437 1756 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 OTOL1A6NHN0 477 aaPredicted RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 NPC1O15118 1278 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
VCL-202ENST00000372755 MELKQ14680 651 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 NPY5RQ15761 445 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 KLBQ86Z14 1044 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 GOLM1Q8NBJ4 401 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 MRGPRX2Q96LB1 330 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 DPH7Q9BTV6 452 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 NANSQ9NR45 359 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 PRELID1Q9Y255 219 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 STYXL1Q9Y6J8 313 aa11.02□□□□□ -0.65
VCL-202ENST00000372755 DNAJB6O75190 326 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 IFNA10P01566 189 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 IFNA4P05014 189 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 JUNDP17535 347 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 EIF4HQ15056 248 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 TCEAL1Q15170 157 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 UPP1Q16831 310 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 C22orf42Q6IC83 251 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 DPY19L3Q6ZPD9 716 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 COMTD1Q86VU5 262 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ACBD7Q8N6N7 88 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 METTL25Q8N6Q8 603 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ASCC1Q8N9N2 400 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 GIMAP5Q96F15 307 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 MAELQ96JY0 434 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 UNKLQ9H9P5 680 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 LIN28AQ9H9Z2 209 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 RAB5BP61020 215 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 BOLLQ8N9W6 283 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 RCBTB1Q8NDN9 531 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 HSD3B7Q9H2F3 369 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 RAB9BQ9NP90 201 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ERVK-19Q9WJR5 959 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 CD8B2A6NJW9 211 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ZNF705EA8MWA4 302 aaPredicted RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 AXIN1O15169 862 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 CD8BP10966 210 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 SPHARQ15513 63 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 UNC50Q53HI1 259 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 ZNF648Q5T619 568 aaPredicted RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 THAP3Q8WTV1 239 aaPredicted RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 RRNAD1Q96FB5 475 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 F2RL3Q96RI0 385 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 PFDN5Q99471 154 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 MGLLQ99685 303 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 SPATA6Q9NWH7 488 aaPredicted RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 C2orf42Q9NWW7 574 aa11.01□□□□□ -0.65
VCL-202ENST00000372755 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
VCL-202ENST00000372755 KIAA0513O60268 411 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms