RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PCDHAC1Q9H158 963 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 EQTNQ9NQ60 294 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 HPF1Q9NWY4 346 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 NDRG3Q9UGV2 375 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 GPN3Q9UHW5 284 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-204ENST00000369530 EML6Q6ZMW3 1958 aa6.5□□□□□ -1.37
CSDE1-204ENST00000369530 G3V2L1 256 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PROM1O43490 865 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 VEGFDO43915 354 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 IGHV2-70P01814 119 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 DNTTP04053 509 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 RPS3P23396 243 aaKnown RBP eCLIP6.49□□□□□ -1.372e-6■■□□□ 11.8
CSDE1-204ENST00000369530 EIF2S3P41091 472 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 GPR3P46089 330 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 DAG1Q14118 895 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CSHL1Q14406 222 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SSPNQ14714 243 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 BAK1Q16611 211 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 RUNDC3AQ59EK9 446 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 METRNLQ641Q3 311 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SLC27A4Q6P1M0 643 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CDH24Q86UP0 819 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 C10orf107Q8IVU9 208 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CARFQ8N187 725 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 FCGR1BQ92637 280 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 HDAC10Q969S8 669 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CNTNAP3BQ96NU0 1288 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 OMDQ99983 421 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TIMM29Q9BSF4 260 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CNTNAP3Q9BZ76 1288 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 POLR1EQ9GZS1 481 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CTSFQ9UBX1 484 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PACSIN3Q9UKS6 424 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PCDHGA6Q9Y5G7 932 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 FITM1A5D6W6 292 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 B4DXG7 233 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 C1QTNF3-AMACRE9PGA6 284 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PPM1DO15297 605 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CEACAM4O75871 244 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 RECQL5O94762 991 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 MATN4O95460 622 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TBX6O95947 436 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 IGSF6O95976 241 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 IL6P05231 212 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PRLHRP49683 370 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SEPHS1P49903 392 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 MAPK10P53779 464 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SGCAQ16586 387 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TBCELQ5QJ74 424 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 REP15Q6BDI9 236 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 DLEU7Q6UYE1 221 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ZYG11AQ6WRX3 759 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CYHR1Q6ZMK1 362 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CFAP77Q6ZQR2 320 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TIGD4Q8IY51 512 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 DUSP18Q8NEJ0 188 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 LPCAT1Q8NF37 534 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 KIAA1143Q96AT1 154 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 APOLD1Q96LR9 279 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 HOPXQ9BPY8 73 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 NUAK2Q9H093 628 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 RACGAP1Q9H0H5 632 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 GSN-AS1Q9NRJ2 163 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TEKT2Q9UIF3 430 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 MRPS7Q9Y2R9 242 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ATP6AP2A0A1C7CYW4 349 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 OR51F1A6NGY5 319 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 LILRA5A6NI73 299 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 A8MUA0 341 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 C1QTNF9BB2RNN3 333 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TARM1B6A8C7 271 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TOX3O15405 576 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CLIC3O95833 236 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ALDOAP04075 364 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 C1QTNF9P0C862 333 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 RORAP35398 523 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 EEF1A1P68104 462 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 EEF1A2Q05639 463 aaKnown RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ELP6Q0PNE2 266 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PTPRCAPQ14761 206 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 EEF1A1P5Q5VTE0 462 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CEP68Q76N32 757 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CCDC116Q8IYX3 515 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ARMC10Q8N2F6 343 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ACBD4Q8NC06 268 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 FBXO15Q8NCQ5 510 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 CCL4L1Q8NHW4 92 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PTERQ96BW5 349 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 MOCOSQ96EN8 888 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 EVA1BQ9NVM1 165 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 KCMF1Q9P0J7 381 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 ENTPD4Q9Y227 616 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 TMEM184BQ9Y519 407 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-204ENST00000369530 PCDHGC4Q9Y5F7 938 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 SNX5Q9Y5X3 404 aa6.49□□□□□ -1.37
CSDE1-204ENST00000369530 FAM95CA0A1B0GW59 222 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms