RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MRGPRX3Q96LB0 322 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 PIP5K1AQ99755 562 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 CHCHD6Q9BRQ6 235 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 C2orf49Q9BVC5 232 aaPredicted RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 MTG2Q9H4K7 406 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ISYNA1Q9NPH2 558 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 DIABLOQ9NR28 239 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 QPCTLQ9NXS2 382 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 GPR83Q9NYM4 423 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 TAS2R9Q9NYW1 312 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 SH3BP4Q9P0V3 963 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 NFKBIL1Q9UBC1 381 aaPredicted RBP10.93□□□□□ -0.66
USF1-201ENST00000368019 KCND3Q9UK17 655 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 TBC1D24Q9ULP9 559 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 ENPP4Q9Y6X5 453 aa10.93□□□□□ -0.66
USF1-201ENST00000368019 LOC100506127A0A0U1RQW1 187 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 ZNF670-ZNF695F2Z2N8 137 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 GPR39O43194 453 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 TNFSF14O43557 240 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 GCM2O75603 506 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 ALX3O95076 343 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 LRATO95237 230 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CLDN7O95471 211 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 IL1AP01583 271 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 ARAFP10398 606 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 LAMP1P11279 417 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SERPINA4P29622 427 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 TIA1P31483 386 aaKnown RBP eCLIP10.92□□□□□ -0.66
USF1-201ENST00000368019 CCR7P32248 378 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 GRK6P43250 576 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 MVDP53602 400 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CRISP1P54107 249 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 PFN3P60673 137 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 PSPHP78330 225 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SPIBQ01892 262 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 IRF8Q02556 426 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 EEF1A2Q05639 463 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 SCN1BQ07699 218 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 MLLT11Q13015 90 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 PDE7AQ13946 482 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 TSTQ16762 297 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 ZXDCQ2QGD7 858 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 COL28A1Q2UY09 1125 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 HNRNPA1L2Q32P51 320 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 SOWAHCQ53LP3 525 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 KIAA0895LQ68EN5 471 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 UNC5DQ6UXZ4 953 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 HSDL2Q6YN16 418 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 TMPRSS11AQ6ZMR5 421 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 PDZD3Q86UT5 571 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 MARCH9Q86YJ5 346 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CLECL1Q8IZS7 167 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 NATD1Q8N6N6 113 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CLDN22Q8N7P3 220 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CELF2-AS1Q8N7Q2 184 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 ZNF557Q8N988 423 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 OR9Q1Q8NGQ5 310 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SPPL2AQ8TCT8 520 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 REPS1Q96D71 796 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 CCDC97Q96F63 343 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 PPP1R16AQ96I34 528 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 MCCC1Q96RQ3 725 aaPredicted RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 MED18Q9BUE0 208 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SRRQ9GZT4 340 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SERGEFQ9UGK8 458 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 SCML1Q9UN30 329 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 ANGPT4Q9Y264 503 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 RAXQ9Y2V3 346 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 LSM2Q9Y333 95 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 CFAP20Q9Y6A4 193 aaKnown RBP10.92□□□□□ -0.66
USF1-201ENST00000368019 V9GYH0 126 aa10.92□□□□□ -0.66
USF1-201ENST00000368019 A0A1B0GTQ1 180 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 A0A1W2PPC4 97 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 HYKKA2RU49 373 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 TRABD2BA6NFA1 517 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 GABRR3A8MPY1 467 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 PRAMEF4O60810 478 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SEMA3DO95025 777 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 WNT1P04628 370 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ALPPP05187 535 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 CXCR2P25025 360 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 PSMA1P25786 263 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 HLA-DMAP28067 261 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 MZF1P28698 734 aaPredicted RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 RCVRNP35243 200 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 CSKP41240 450 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 IDH2P48735 452 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 PCBP3P57721 371 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 DCDC1P59894 354 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 RACK1P63244 317 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 MRPS15P82914 257 aaKnown RBP10.91□□□□□ -0.66
USF1-201ENST00000368019 RUNX1T1Q06455 604 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 ILKQ13418 452 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SCARB2Q14108 478 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 SSX1Q16384 188 aa10.91□□□□□ -0.66
USF1-201ENST00000368019 OCLNQ16625 522 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms