RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 MFSD6LQ8IWD5 586 aa6.94□□□□□ -1.3
VTA1-202ENST00000367630 ASB15Q8WXK1 588 aa6.94□□□□□ -1.3
VTA1-202ENST00000367630 FOXRED1Q96CU9 486 aaPredicted RBP6.94□□□□□ -1.3
VTA1-202ENST00000367630 FURINP09958 794 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CTSEP14091 401 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SOX11P35716 441 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 RPL4P36578 427 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 HTR3AP46098 478 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 RAB2AP61019 212 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 C11orf96Q7Z7L8 435 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TIGD4Q8IY51 512 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CAPNS2Q96L46 248 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 MBOAT4Q96T53 435 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 NMNAT1Q9HAN9 279 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 OR10H1Q9Y4A9 318 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SLC5A10A0PJK1 596 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TLX3O43711 291 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 C1SP09871 688 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 HTR6P50406 440 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CTBP2P56545 445 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 YPEL5P62699 121 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 HNRNPA1L2Q32P51 320 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZNF789Q5FWF6 425 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TCTE1Q5JU00 501 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ATAT1Q5SQI0 421 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CCNJQ5T5M9 372 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TMEM17Q86X19 198 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZNF619Q8N2I2 560 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 KRTCAP2Q8N6L1 136 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 OR4C15Q8NGM1 316 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 OR5K2Q8NHB8 316 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 POF1BQ8WVV4 589 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 FEVQ99581 238 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TCF7L1Q9HCS4 588 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 LYRM4Q9HD34 91 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 FGF20Q9NP95 211 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 NPFFR2Q9Y5X5 522 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 KRBA1A5PL33 1030 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 MSL3P1P0C860 447 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ATF6P18850 670 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 OPRL1P41146 370 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 HMGA2P52926 109 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 FOXA1P55317 472 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 RAG2P55895 527 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 HSPB3Q12988 150 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 EFR3AQ14156 821 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 COL28A1Q2UY09 1125 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZNF782Q6ZMW2 699 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 DPY19L3Q6ZPD9 716 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 LHFPL3Q86UP9 236 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 GATAD2AQ86YP4 633 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 MMAAQ8IVH4 418 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TUBB1Q9H4B7 451 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 RNF121Q9H920 327 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CD93Q9NPY3 652 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ACSS2Q9NR19 701 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SNTG1Q9NSN8 517 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 AGAP14A8MT82 685 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 TAPBPO15533 448 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 LEFTY1O75610 366 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ERAL1O75616 437 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 RASGRP1O95267 797 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CD63P08962 238 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 NELFEP18615 380 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZMYND11Q15326 602 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
VTA1-202ENST00000367630 NXNL2Q5VZ03 156 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 FRMPD2BQ6IN97 320 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 KLHL24Q6TFL4 600 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 OR2T11Q8NH01 316 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CNIH3Q8TBE1 160 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CD99L2Q8TCZ2 262 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ASB17Q8WXJ9 295 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 PYCR2Q96C36 320 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 OR51I1Q9H343 314 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 EMC7Q9NPA0 242 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ANKRD28O15084 1053 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 CDRT1O95170 752 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 FEN1P39748 380 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 GALNT12Q8IXK2 581 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 SLC5A8Q8N695 610 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ACVR1CQ8NER5 493 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 WDR20Q8TBZ3 569 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 GGHQ92820 318 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 PNPLA2Q96AD5 504 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 PDXPQ96GD0 296 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 APIPQ96GX9 242 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 ZNF486Q96H40 463 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 CNN2Q99439 309 aaKnown RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 KIR3DX1Q9H7L2 352 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 PLEKHA6Q9Y2H5 1048 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 MAB21L2Q9Y586 359 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 KIR2DS5A0A0G2JLQ3 304 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 A0A0G2JNG1 304 aa6.93□□□□□ -1.3
VTA1-202ENST00000367630 I6L893 689 aaPredicted RBP6.93□□□□□ -1.3
VTA1-202ENST00000367630 KIR2DS3K7RE56 304 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms