RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 FBXL20Q96IG2 436 aa16.65■□□□□ 0.26
CLK2-202ENST00000361168 THOC3Q96J01 351 aaKnown RBP16.65■□□□□ 0.26
CLK2-202ENST00000361168 OR52E6Q96RD3 313 aa16.65■□□□□ 0.26
CLK2-202ENST00000361168 PRPF18Q99633 342 aaKnown RBP16.65■□□□□ 0.26
CLK2-202ENST00000361168 CXorf36Q9H7Y0 433 aa16.65■□□□□ 0.26
CLK2-202ENST00000361168 ATAD3AQ9NVI7 634 aa16.65■□□□□ 0.26
CLK2-202ENST00000361168 TMEM200CA6NKL6 621 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 UPK1AO00322 258 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 FCHO1O14526 889 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 S100A3P33764 101 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 MRPL19P49406 292 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 CLNS1AP54105 237 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 UCNP55089 124 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 SLC37A1P57057 533 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 SRSF11Q05519 484 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 MAP4K2Q12851 820 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 RCAN2Q14206 197 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 SPRED3Q2MJR0 410 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 SLC2A7Q6PXP3 512 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 C9orf40Q8IXQ3 194 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 TMEM102Q8N9M5 508 aaPredicted RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 CLEC1AQ8NC01 280 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 OR1N1Q8NGS0 311 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 OR5AK3PQ8NH89 298 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 BRIX1Q8TDN6 353 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 ELP4Q96EB1 424 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 ZBED6CLQ96FA7 236 aaPredicted RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 IP6K3Q96PC2 410 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 NPAS2Q99743 824 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 ZBTB20Q9HC78 741 aaPredicted RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 SERHLQ9NQF3 203 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 SLAMF8Q9P0V8 285 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 ZNF639Q9UID6 485 aa16.64■□□□□ 0.26
CLK2-202ENST00000361168 PPIEQ9UNP9 301 aaKnown RBP16.64■□□□□ 0.26
CLK2-202ENST00000361168 TRBV11-1A0A0K0K1C0 115 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 A8MUI8 341 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 GSNP06396 782 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 ITGA3P26006 1051 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 RPL3P39023 403 aaKnown RBP16.64■□□□□ 0.25
CLK2-202ENST00000361168 ATP4BP51164 291 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 FUT7Q11130 342 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 TERF2Q15554 542 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 FHL5Q5TD97 284 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 DNAJC14Q6Y2X3 702 aaPredicted RBP16.64■□□□□ 0.25
CLK2-202ENST00000361168 TREML1Q86YW5 311 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 FAM9CQ8IZT9 166 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 GALNT16Q8N428 558 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 ZNF615Q8N8J6 731 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 GLB1L3Q8NCI6 653 aaPredicted RBP16.64■□□□□ 0.25
CLK2-202ENST00000361168 FDCSPQ8NFU4 85 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 OR52R1Q8NGF1 315 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 FER1L6-AS2Q96M78 137 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 PRORYQ9H606 182 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 ATP13A2Q9NQ11 1180 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 ACSS1Q9NUB1 689 aaPredicted RBP16.64■□□□□ 0.25
CLK2-202ENST00000361168 SNX8Q9Y5X2 465 aa16.64■□□□□ 0.25
CLK2-202ENST00000361168 FAM234BA2RU67 622 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 PCDH17O14917 1159 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 CFLARO15519 480 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 CPSF4O95639 269 aaKnown RBP16.63■□□□□ 0.25
CLK2-202ENST00000361168 GPC1P35052 558 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 KLF10Q13118 480 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 TBR1Q16650 682 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 PAGE3Q5JUK9 113 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 SAMD14Q8IZD0 417 aaPredicted RBP16.63■□□□□ 0.25
CLK2-202ENST00000361168 MORN4Q8NDC4 146 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 BCAS4Q8TDM0 211 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 ZBTB18Q99592 522 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 SEMA4CQ9C0C4 833 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 OR10A5Q9H207 317 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 MMP25Q9NPA2 562 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 PTGFRNQ9P2B2 879 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 BCAP29Q9UHQ4 241 aa16.63■□□□□ 0.25
CLK2-202ENST00000361168 KMT2BQ9UMN6 2715 aaPredicted RBP16.63■□□□□ 0.25
CLK2-202ENST00000361168 LOC100653049A0A140TA62 436 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 PRSS51A0A1B0GVH4 220 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 K7EM74 188 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 RNASET2O00584 256 aaKnown RBP16.62■□□□□ 0.25
CLK2-202ENST00000361168 ZNF354AO60765 605 aaPredicted RBP16.62■□□□□ 0.25
CLK2-202ENST00000361168 KRT34O76011 436 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 SERPINA7P05543 415 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 PRKAG1P54619 331 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 CASP9P55211 416 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 AIMP2Q13155 320 aaKnown RBP16.62■□□□□ 0.25
CLK2-202ENST00000361168 BIKQ13323 160 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 GAB1Q13480 694 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 NNATQ16517 81 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 C16orf52Q8NHV5 167 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 M1APQ8TC57 530 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 ZNF675Q8TD23 568 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 SPDL1Q96EA4 605 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
CLK2-202ENST00000361168 ARL2BPQ9Y2Y0 163 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 IL6P05231 212 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 GALNSP34059 522 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 EMDP50402 254 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 TLR1Q15399 786 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 EXT1Q16394 746 aa16.62■□□□□ 0.25
CLK2-202ENST00000361168 GTDC1Q4AE62 458 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms