RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 LIMS1P48059 325 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 SNRPGP62308 76 aaKnown RBP8.81□□□□□ -1
GTF3C2-202ENST00000359541 ZNF45Q02386 682 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 CBX3Q13185 183 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 COL9A2Q14055 689 aaPredicted RBP8.81□□□□□ -1
GTF3C2-202ENST00000359541 PRAMEF8Q5VWM4 474 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 PRAMEF7Q5VXH5 474 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 LAIR1Q6GTX8 287 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 CCDC103Q8IW40 242 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 SLC34A3Q8N130 599 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 TMEM145Q8NBT3 493 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 ZNF784Q8NCA9 323 aaPredicted RBP8.81□□□□□ -1
GTF3C2-202ENST00000359541 TEX47Q8TBZ9 253 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 TMEM80Q96HE8 168 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 SLC38A2Q96QD8 506 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 OR2M4Q96R27 311 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 MGLLQ99685 303 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 MND1Q9BWT6 205 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 MROQ9BYG7 248 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 FKBP14Q9NWM8 211 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 OSGIN1Q9UJX0 560 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 SPACA6W5XKT8 324 aa8.81□□□□□ -1
GTF3C2-202ENST00000359541 A0A0A6YYD5 115 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TRBV4-1A0A0J9YWV2 114 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 DUXAA6NLW8 204 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 EMC8O43402 210 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 RNGTTO60942 597 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 SLC35G6P0C7Q6 338 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TNNI3P19429 210 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 PSMA1P25786 263 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 ACVR2AP27037 513 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TLX1P31314 330 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 TIE1P35590 1138 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 RGS6P49758 472 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TAS2R41P59536 307 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TSEN54Q7Z6J9 526 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 RPL3LQ92901 407 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 SIGLEC11Q96RL6 698 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 IL4I1Q96RQ9 567 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ZNF717Q9BY31 904 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 GLIPR2Q9H4G4 154 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ALPPP05187 535 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ACADMP11310 421 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 MYOGP15173 224 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 CSTF2P33240 577 aaKnown RBP eCLIP8.8□□□□□ -14e-7■■□□□ 11.7
GTF3C2-202ENST00000359541 TGFBR2P37173 567 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SLC19A1P41440 591 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TNFRSF4P43489 277 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 LASP1Q14847 261 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 SLX4IPQ5VYV7 408 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 OR2A1Q8NGT9 310 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 C1QTNF2Q9BXJ5 285 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SLAMF7Q9NQ25 335 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SIRT3Q9NTG7 399 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 FTSJ1Q9UET6 329 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SCML1Q9UN30 329 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 IFT52Q9Y366 437 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 GPC6Q9Y625 555 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 A0A1W2PPV9 198 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 AP3D1O14617 1153 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 AXIN1O15169 862 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SMSP52788 366 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SEC13P55735 322 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 NCF4Q15080 339 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TSTQ16762 297 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 TPRG1LQ5T0D9 272 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TCTN3Q6NUS6 607 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 GDPGP1Q6ZNW5 385 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 NRROSQ86YC3 692 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ACOT4Q8N9L9 421 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TP53I13Q8NBR0 393 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 OR8K5Q8NH50 307 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ADAMTS15Q8TE58 950 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 PRRC1Q96M27 445 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 APOOQ9BUR5 198 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 PINK1Q9BXM7 581 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ZBTB20Q9HC78 741 aaPredicted RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 BCL2L10Q9HD36 194 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TRNAU1APQ9NX07 287 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 OR6C2Q9NZP2 312 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 PHF11Q9UIL8 331 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 E9PQ18 207 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SOX14O95416 240 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 BMP4P12644 408 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 NTSR1P30989 418 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 INPP1P49441 399 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 RPS15AP62244 130 aaKnown RBP8.8□□□□□ -1
GTF3C2-202ENST00000359541 RHAGQ02094 409 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 MAPK11Q15759 364 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ZNF181Q2M3W8 571 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TMEM44Q2T9K0 475 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 KLHL22Q53GT1 634 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 SFTPA1Q8IWL2 248 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 TRIM48Q8IWZ4 208 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 LINC01555Q8NAE3 123 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 OR2L3Q8NG85 312 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 KXD1Q9BQD3 176 aa8.8□□□□□ -1
GTF3C2-202ENST00000359541 ABCG4Q9H172 646 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms