RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GALNSP34059 522 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 MAP4K2Q12851 820 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 UNQ6494/PRO21346Q6UXR6 183 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 DLEU7Q6UYE1 221 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 MSRB3Q8IXL7 192 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 VWA5B2Q8N398 1253 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 FBXO27Q8NI29 283 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 PSMA8Q8TAA3 256 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 SLC2A12Q8TD20 617 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 DPH1Q9BZG8 443 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 OR8D2Q9GZM6 311 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 P4HTMQ9NXG6 502 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 TAGLN3Q9UI15 199 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF639Q9UID6 485 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 FBXL4Q9UKA2 621 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 RAXQ9Y2V3 346 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 CHD8Q9HCK8 2581 aa23.66■■□□□ 1.38
SSBP3-202ENST00000357475 A0A1W2PQ72 361 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 CDC14CA4D256 554 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 MRASO14807 208 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 AIM2O14862 343 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 CBX7O95931 251 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 SOAT1P35610 550 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 GPR143P51810 404 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 MMEL1Q495T6 779 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 SPACA3Q8IXA5 215 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 GOT1L1Q8NHS2 421 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF721Q8TF20 911 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 CMTM5Q96DZ9 223 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 AURKBQ96GD4 344 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-202ENST00000357475 SENP5Q96HI0 755 aaPredicted RBP23.65■■□□□ 1.38
SSBP3-202ENST00000357475 LPAR4Q99677 370 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 EFHD1Q9BUP0 239 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 TRIM8Q9BZR9 551 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF160Q9HCG1 818 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 SLC25A37Q9NYZ2 338 aa23.65■■□□□ 1.38
SSBP3-202ENST00000357475 TAF4O00268 1085 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 UPK1AO00322 258 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF621Q6ZSS3 439 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 RAB43Q86YS6 212 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 DPP10Q8N608 796 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 OR14A16Q8NHC5 309 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 FAM120BQ96EK7 910 aaKnown RBP23.64■■□□□ 1.38
SSBP3-202ENST00000357475 IMMP1LQ96LU5 166 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 CCNL2Q96S94 520 aaPredicted RBP23.64■■□□□ 1.38
SSBP3-202ENST00000357475 SLC39A3Q9BRY0 314 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 NUDT9Q9BW91 350 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 VAPAQ9P0L0 249 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 ZNF223Q9UK11 482 aaPredicted RBP23.64■■□□□ 1.38
SSBP3-202ENST00000357475 PCDHGB4Q9UN71 923 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 SSUH2Q9Y2M2 353 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 PCDHB14Q9Y5E9 798 aa23.64■■□□□ 1.38
SSBP3-202ENST00000357475 A0A096LPI6 279 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 BBIP1A8MTZ0 92 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 PLOD2O00469 737 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 IGKV3-11P04433 115 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 SLC26A5P58743 744 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 GABPB1Q06547 395 aaPredicted RBP23.64■■□□□ 1.37
SSBP3-202ENST00000357475 FUT7Q11130 342 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 STX5Q13190 355 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 NFYCQ13952 458 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 CAPRIN1Q14444 709 aaKnown RBP23.64■■□□□ 1.37
SSBP3-202ENST00000357475 KIF2BQ8N4N8 673 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 OR52R1Q8NGF1 315 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 DAZLQ92904 295 aaKnown RBP23.64■■□□□ 1.37
SSBP3-202ENST00000357475 NCLNQ969V3 563 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 FBXL20Q96IG2 436 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 NEUROD4Q9HD90 331 aa23.64■■□□□ 1.37
SSBP3-202ENST00000357475 FXYD1O00168 92 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 PRKAG1P54619 331 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 CASP9P55211 416 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 Q0VFX4 171 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 LRIF1Q5T3J3 769 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 NDUFAF7Q7L592 441 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 SZRD1Q7Z422 152 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 DHDDSQ86SQ9 333 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 OR2L13Q8N349 312 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 ZNF615Q8N8J6 731 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 APCDD1LQ8NCL9 501 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 NSL1Q96IY1 281 aa23.63■■□□□ 1.37
SSBP3-202ENST00000357475 URB1O60287 2271 aaKnown RBP23.63■■□□□ 1.37
SSBP3-202ENST00000357475 TRBV5-3A0A0A0MS03 114 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 RNF103-CHMP3A0A140T963 221 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 PCDH17O14917 1159 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 PRKNO60260 465 aaPredicted RBP23.62■■□□□ 1.37
SSBP3-202ENST00000357475 PLOD3O60568 738 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 KCNH1O95259 989 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 ANP32DO95626 131 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 TRPC1P48995 793 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 CCT3P49368 545 aaKnown RBP23.62■■□□□ 1.37
SSBP3-202ENST00000357475 SPDYE7PQ495Y7 208 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 COQ5Q5HYK3 327 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 WDR53Q7Z5U6 358 aaPredicted RBP23.62■■□□□ 1.37
SSBP3-202ENST00000357475 MORN4Q8NDC4 146 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 B3GNT7Q8NFL0 401 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 OR1N1Q8NGS0 311 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 SLC35A5Q9BS91 424 aa23.62■■□□□ 1.37
SSBP3-202ENST00000357475 ZCCHC3Q9NUD5 404 aaKnown RBP23.62■■□□□ 1.37
SSBP3-202ENST00000357475 DDX18Q9NVP1 670 aaKnown RBP23.62■■□□□ 1.37
SSBP3-202ENST00000357475 BCAP29Q9UHQ4 241 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms