RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NUP43Q8NFH3 380 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PXYLP1Q8TE99 480 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MYRFLQ96LU7 910 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 BCL7BQ9BQE9 202 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CLSTN3Q9BQT9 956 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 HINT2Q9BX68 163 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MINDY3Q9H8M7 445 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 DNAJB11Q9UBS4 358 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TJP1Q07157 1748 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LAMB4A4D0S4 1761 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RRP8O43159 456 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RGS9O75916 674 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SFTPBP07988 381 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 GNAO1P09471 354 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CBLP22681 906 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AFF1P51825 1210 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TPTEP56180 551 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ARL6IP1Q15041 203 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PTPRRQ15256 657 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 UNC5DQ6UXZ4 953 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF367Q7RTV3 350 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 OLIG1Q8TAK6 271 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM203Q969S6 136 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF689Q96CS4 500 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PITX2Q99697 317 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ACTRT3Q9BYD9 372 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ENAMQ9NRM1 1142 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ABCG2Q9UNQ0 655 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MYH6P13533 1939 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 NWD2Q9ULI1 1742 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD30BLA7E2S9 258 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LOC730098B7Z3J9 87 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 M0QX08 132 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 EI24O14681 340 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 KCNK5O95279 499 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CHRNB2P17787 502 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 GLDCP23378 1020 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AK4P27144 223 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MLLT6P55198 1093 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 KCNJ11Q14654 390 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RAB11BQ15907 218 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LRIT3Q3SXY7 679 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AADACL4Q5VUY2 407 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM107Q6UX40 140 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 AMDHD1Q96NU7 426 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RABL2AQ9UBK7 228 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RABL2BQ9UNT1 228 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MYO5AQ9Y4I1 1855 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 A0A1W2PPW3 197 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ARGFXA6NJG6 315 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TSPAN4O14817 238 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LILRB3O75022 631 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SDC3O75056 442 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PLATP00750 562 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 C6P13671 934 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CD72P21854 359 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CHMP24386 653 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TIA1P31483 386 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 BMPR1AP36894 532 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MC3RP41968 323 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TBPL1P62380 186 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RING1Q06587 406 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RUNX2Q13950 521 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CDNFQ49AH0 187 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM69Q5SWH9 247 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 EEF1A1P5Q5VTE0 462 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 OR4C11Q6IEV9 310 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 OR4N4Q8N0Y3 316 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LILRB2Q8N423 598 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TCEANCQ8N8B7 351 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 POGLUT1Q8NBL1 392 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 CRYGNQ8WXF5 182 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SULT4A1Q9BR01 284 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RNF39Q9H2S5 420 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 APOL3O95236 402 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SOX14O95416 240 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 DRD1P21728 446 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 HOXD13P35453 343 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 TDGQ13569 410 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RUNX3Q13761 415 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PAFAH1B3Q15102 231 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LPAL2Q16609 132 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 MRPL21Q7Z2W9 205 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF384Q8TF68 577 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 JPH3Q8WXH2 748 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF382Q96SR6 550 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 B3GNT2Q9NY97 397 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 OR1A2Q9Y585 309 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 SLC35F4A4IF30 521 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 IGLON5A6NGN9 336 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 A6NIZ1 184 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 LRRTM2O43300 516 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 GTF2F2P13984 249 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 HTR3AP46098 478 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 ATP4BP51164 291 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 PSMA6P60900 246 aaKnown RBP5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RAP1BP61224 184 aa5.29□□□□□ -1.56
PTPRD-202ENST00000356435 RAP1AP62834 184 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms