RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 B3GNT3Q9Y2A9 372 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 KANTRA0A1W2PQU2 76 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 LYRM1O43325 122 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 IL3P08700 152 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 CR2P20023 1033 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 DDCP20711 480 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ACVR1BP36896 505 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 OR12D2P58182 307 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GABARAPL2P60520 117 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GRSF1Q12849 480 aaKnown RBP eCLIP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GALEQ14376 348 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 TAF13Q15543 124 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 FAM205BPQ63HN1 556 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GTF2IRD2BQ6EKJ0 949 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 VITQ6UXI7 678 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 GTF2IRD2Q86UP8 949 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 NLGN4XQ8N0W4 816 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 SLC39A11Q8N1S5 342 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 C17orf62Q9BQA9 187 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 SLA2Q9H6Q3 261 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 COPZ2Q9P299 210 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 ZNF282Q9UDV7 671 aaPredicted RBP13.4□□□□□ -0.26
SREBF1-202ENST00000355815 PLEKHA6Q9Y2H5 1048 aa13.4□□□□□ -0.26
SREBF1-202ENST00000355815 RIIAD1A6NNX1 92 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SCN2BO60939 215 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 REM1O75628 298 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 HPRP00739 348 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ADH5P11766 374 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 DBPQ10586 325 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SNTA1Q13424 505 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 DSG2Q14126 1118 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 STK11Q15831 433 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ZDHHC20Q5W0Z9 365 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SLC39A5Q6ZMH5 540 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 C7orf50Q9BRJ6 194 aaKnown RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 TAS2R10Q9NYW0 307 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OR10H1Q9Y4A9 318 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 IRGMA1A4Y4 181 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ANXA2P2A6NMY6 339 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PI15O43692 258 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 TSPAN12O95859 305 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ANXA2P07355 339 aaKnown RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ACADMP11310 421 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 VSX2P58304 361 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PUS10Q3MIT2 529 aaKnown RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 CYHR1Q6ZMK1 362 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF438Q7Z4V0 828 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 HMGB4Q8WW32 186 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 CPNE2Q96FN4 548 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 LRR1Q96L50 414 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 TCF7L1Q9HCS4 588 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PCDH17O14917 1159 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ARPC5O15511 151 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 NPPAP01160 153 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 DSTNP60981 165 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ERVK-25P63136 954 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OXA1LQ15070 435 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 GRK1Q15835 563 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 HYAL4Q2M3T9 481 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF791Q3KP31 576 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ATG9BQ674R7 924 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SLC30A6Q6NXT4 461 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OVCA2Q8WZ82 227 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 COQ8BQ96D53 544 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OR10A4Q9H209 315 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 AP1G1O43747 822 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 RPN2P04844 631 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PROS1P07225 676 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 RETP07949 1114 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 PEPDP12955 493 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 JUPP14923 745 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OR3A3P47888 321 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 SOX2P48431 317 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 ID2Q02363 134 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 CNIH2Q6PI25 160 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 DLEU7Q6UYE1 221 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 CFAP77Q6ZQR2 320 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 RTL4Q6ZR62 310 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 B3GNT8Q7Z7M8 397 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 KCNK12Q9HB15 430 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 HEBP1Q9NRV9 189 aa13.39□□□□□ -0.27
SREBF1-202ENST00000355815 STOX2Q9P2F5 926 aaPredicted RBP13.39□□□□□ -0.27
SREBF1-202ENST00000355815 GATBO75879 557 aaKnown RBP13.38□□□□□ -0.27
SREBF1-202ENST00000355815 SPDEFO95238 335 aa13.38□□□□□ -0.27
SREBF1-202ENST00000355815 ALPLP05186 524 aa13.38□□□□□ -0.27
SREBF1-202ENST00000355815 PVALBP20472 110 aaPredicted RBP13.38□□□□□ -0.27
SREBF1-202ENST00000355815 PTPN6P29350 595 aa13.38□□□□□ -0.27
SREBF1-202ENST00000355815 TGM3Q08188 693 aa13.38□□□□□ -0.27
SREBF1-202ENST00000355815 LASP1Q14847 261 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms