RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 NTMQ9P121 344 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 SNX10Q9Y5X0 201 aa10.12□□□□□ -0.79
CAPN3-203ENST00000349748 TRBV5-3A0A0A0MS03 114 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 TNFRSF11BO00300 401 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MOCS2O96007 188 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SEMG1P04279 462 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SPI1P17947 270 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 C4BPBP20851 252 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 LAP3P28838 519 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 VEGFCP49767 419 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 TIAL1Q01085 375 aaKnown RBP eCLIP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 KCNA10Q16322 511 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 DUOXA1Q1HG43 343 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 TMEM44Q2T9K0 475 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MARCH8Q5T0T0 291 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 LRRN1Q6UXK5 716 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CILP2Q8IUL8 1156 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CAMKVQ8NCB2 501 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 METTL6Q8TCB7 284 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SLC25A28Q96A46 364 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ARL6Q9H0F7 186 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ABCG8Q9H221 673 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ADAMTS5Q9UNA0 930 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CHD5Q8TDI0 1954 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 RLFQ13129 1914 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SHISA3A0PJX4 238 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SUSD5O60279 629 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CNR2P34972 360 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ECH1Q13011 328 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SMCO1Q147U7 214 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 IRF4Q15306 451 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ATAT1Q5SQI0 421 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MANEAQ5SRI9 462 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 METAP1DQ6UB28 335 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NAA40Q86UY6 237 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 DEFB106AQ8N104 65 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 OR10K1Q8NGX5 313 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 THAP6Q8TBB0 222 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CACNG6Q9BXT2 260 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 DPY30Q9C005 99 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CA10Q9NS85 328 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 IMP3Q9NV31 184 aaKnown RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MED11Q9P086 117 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NFKBIL1Q9UBC1 381 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PCTPQ9UKL6 214 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 OR10H1Q9Y4A9 318 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NUBP2Q9Y5Y2 271 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NPTNQ9Y639 398 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 LCTP09848 1927 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF638Q14966 1978 aaKnown RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ANK1P16157 1881 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ARHGEF33A8MVX0 844 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ZNF593O00488 134 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SLC31A2O15432 143 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 HCRTO43612 131 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 CACNG3O60359 315 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 GJB1P08034 283 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 GABRA1P14867 456 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ARSDP51689 593 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 GPR143P51810 404 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NR0B1P51843 470 aaKnown RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 FABP5Q01469 135 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 MLLT11Q13015 90 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 ABRAXAS2Q15018 415 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 OR5M10Q6IEU7 315 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SLC27A1Q6PCB7 646 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NUDT13Q86X67 352 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NKAIN4Q8IVV8 208 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PXT1Q8NFP0 134 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 OR5M9Q8NGP3 310 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 SLC35F5Q8WV83 523 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PIGKQ92643 395 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PPP3R2Q96LZ3 170 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 RCOR3Q9P2K3 495 aaPredicted RBP10.11□□□□□ -0.79
CAPN3-203ENST00000349748 FLVCR2Q9UPI3 526 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 RAI2Q9Y5P3 530 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 PIAS3Q9Y6X2 628 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NUP205Q92621 2012 aa10.11□□□□□ -0.79
CAPN3-203ENST00000349748 NUP214P35658 2090 aaPredicted RBP10.1□□□□□ -0.79
CAPN3-203ENST00000349748 A0A1W2PPE3 182 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 C5orf52A6NGY3 159 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 CNMDO75829 334 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 S1PR4O95977 384 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 ZDHHC11BP0C7U3 371 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 DDX6P26196 483 aaKnown RBP eCLIP10.1□□□□□ -0.79
CAPN3-203ENST00000349748 S100A11P31949 105 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 KDELR2P33947 212 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 CDC42P60953 191 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 SPCS3P61009 180 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 PRR5P85299 388 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 FABP9Q0Z7S8 132 aa10.1□□□□□ -0.79
CAPN3-203ENST00000349748 ERV3-1Q14264 604 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms