RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 RAB8AP61006 207 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SRSF5Q13243 272 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
NUP43-201ENST00000340413 SPDYE7PQ495Y7 208 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 DEFB134Q4QY38 66 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 RNF220Q5VTB9 566 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 HIPK1Q86Z02 1210 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 GRAMD2AQ8IUY3 354 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 AMER3Q8N944 861 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 NUP43Q8NFH3 380 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 TP53INP1Q96A56 240 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 CIDECQ96AQ7 238 aaPredicted RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 EXOSC8Q96B26 276 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 SLC46A1Q96NT5 459 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 SORBS1Q9BX66 1292 aaKnown RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 ARRDC1-AS1Q9H2J1 176 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 MAT2BQ9NZL9 334 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 C19orf25Q9UFG5 118 aaPredicted RBP6.73□□□□□ -1.33
NUP43-201ENST00000340413 FBXW2Q9UKT8 454 aa6.73□□□□□ -1.33
NUP43-201ENST00000340413 ACOX3O15254 700 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SDC3O75056 442 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 HOXB3P14651 431 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 MATN1P21941 496 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 TRHRP34981 398 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 GPC1P35052 558 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 HMGA2P52926 109 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 RHAGQ02094 409 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 TEKQ02763 1124 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 IFI44LQ53G44 452 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ZNF517Q6ZMY9 492 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 ZNF574Q6ZN55 896 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 SLC47A1Q96FL8 570 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 DEPDC7Q96QD5 511 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 IKZF5Q9H5V7 419 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SLC6A13Q9NSD5 602 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 WDR70Q9NW82 654 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ACAD8Q9UKU7 415 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 PCDHGB6Q9Y5F9 930 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 LOC102723996A0A087X1L8 192 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 A8MUI8 341 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 HMGN4O00479 90 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 OXSR1O95747 527 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 LDLRP01130 860 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ALOX5P09917 674 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 NAGAP17050 411 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 CDK9P50750 372 aaKnown RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 IL18R1Q13478 541 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 FBXW10Q5XX13 1052 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 C18orf63Q68DL7 685 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 TMEM81Q6P7N7 255 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 OVCH1Q7RTY7 1134 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ZNF440Q8IYI8 595 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SLC15A4Q8N697 577 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 OR51Q1Q8NH59 317 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 OR5K1Q8NHB7 308 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 DGAT2Q96PD7 388 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 CXorf21Q9HAI6 301 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 CACYBPQ9HB71 228 aaKnown RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 FGF21Q9NSA1 209 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 KCND3Q9UK17 655 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SPAG17Q6Q759 2223 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 C5orf58C9J3I9 102 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 FAAHO00519 579 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 PGRMC2O15173 223 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ADAMDEC1O15204 470 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SUV39H1O43463 412 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 RASAL1O95294 804 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 AGXTP21549 392 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ALDH4A1P30038 563 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ALDH9A1P49189 494 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 PPP1CAP62136 330 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 PPP1R3BQ86XI6 285 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 GALNT12Q8IXK2 581 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 FBXL20Q96IG2 436 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 NRTNQ99748 197 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ARHGDIGQ99819 225 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 G6PC3Q9BUM1 346 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 SEMA4CQ9C0C4 833 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ZNF350Q9GZX5 532 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 MTHFD2LQ9H903 347 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 IL1RL2Q9HB29 575 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ZCCHC3Q9NUD5 404 aaKnown RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 ERVK-11Q9UQG0 969 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 TMEM184BQ9Y519 407 aaPredicted RBP6.72□□□□□ -1.33
NUP43-201ENST00000340413 CLDN16Q9Y5I7 305 aa6.72□□□□□ -1.33
NUP43-201ENST00000340413 ARHGEF17Q96PE2 2063 aaPredicted RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 H0YAE9 185 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 CLOCKO15516 846 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 DENRO43583 198 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 CD247P20963 164 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 DRD5P21918 477 aa6.71□□□□□ -1.33
NUP43-201ENST00000340413 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.33
NUP43-201ENST00000340413 PTDSS1P48651 473 aaKnown RBP6.71□□□□□ -1.33
NUP43-201ENST00000340413 FOLH1Q04609 750 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms