RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TPRG1LQ5T0D9 272 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 PRAMEF13Q5VWM6 474 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 PLAG1Q6DJT9 500 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 FRMPD2BQ6IN97 320 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 NCCRP1Q6ZVX7 275 aaPredicted RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 PARS2Q7L3T8 475 aaKnown RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 CCDC190Q86UF4 302 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 PDZD3Q86UT5 571 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 RNF130Q86XS8 419 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 SYTL1Q8IYJ3 562 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 RNF175Q8N4F7 328 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 SCAIQ8N9R8 606 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 SIPA1Q96FS4 1042 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 TRNT1Q96Q11 434 aaKnown RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 FAM129BQ96TA1 746 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 RHNO1Q9BSD3 238 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 FUZQ9BT04 418 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 WRAP53Q9BUR4 548 aaKnown RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 GPR174Q9BXC1 333 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 MS4A8Q9BY19 250 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 MOV10Q9HCE1 1003 aaKnown RBP10.21□□□□□ -0.77
RTN3-201ENST00000338850 ISYNA1Q9NPH2 558 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 RASSF1Q9NS23 344 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 EHD3Q9NZN3 535 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 SUSD2Q9UGT4 822 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 DOLKQ9UPQ8 538 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 IFT52Q9Y366 437 aa10.21□□□□□ -0.77
RTN3-201ENST00000338850 FRYQ5TBA9 3013 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 SPAARA0A1B0GVQ0 90 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TRBC2A0A5B9 178 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 DSCR3O14972 297 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CAPN5O15484 640 aaPredicted RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 SPINT1O43278 529 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 MMP20O60882 483 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 LGI1O95970 557 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 C1QCP02747 245 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 SCG5P05408 212 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 PROS1P07225 676 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 SYPP08247 313 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CD59P13987 128 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 NR4A1P22736 598 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 C21orf33P30042 268 aaPredicted RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 CHI3L1P36222 383 aaPredicted RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 ANXA11P50995 505 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 ST3GAL4Q11206 333 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 HEPACAMQ14CZ8 416 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 PTGES3Q15185 160 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 SLC5A12Q1EHB4 618 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 INAVAQ3KP66 663 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 ARMCX4Q5H9R4 360 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CATSPEREQ5SY80 951 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMEM236Q5W0B7 351 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMIGD1Q6UXZ0 262 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 ADAMTSL4Q6UY14 1074 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMEM64Q6YI46 380 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 ERN2Q76MJ5 926 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 GALNT10Q86SR1 603 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 ATCAYQ86WG3 371 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CACUL1Q86Y37 369 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 HDDC3Q8N4P3 179 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CADM4Q8NFZ8 388 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CDC26Q8NHZ8 85 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 SFXN5Q8TD22 340 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CYB5D2Q8WUJ1 264 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 PROX1Q92786 737 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 RPL3LQ92901 407 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 MAL2Q969L2 176 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 RAB7BQ96AH8 199 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 NUS1Q96E22 293 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 NIPSNAP1Q9BPW8 284 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 ZNF717Q9BY31 904 aaPredicted RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 ALOXE3Q9BYJ1 711 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 OR52A5Q9H2C5 316 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMEM245Q9H330 911 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 BCL2L10Q9HD36 194 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 MIEF1Q9NQG6 463 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 TMEM184CQ9NVA4 438 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 MRPS18AQ9NVS2 196 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 TAAR2Q9P1P5 351 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CCDC88CQ9P219 2028 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 LSM2Q9Y333 95 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 GRIP1Q9Y3R0 1128 aa10.2□□□□□ -0.78
RTN3-201ENST00000338850 CFAP20Q9Y6A4 193 aaKnown RBP10.2□□□□□ -0.78
RTN3-201ENST00000338850 CKAP5Q14008 2032 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PRAMEF33A0A0G2JMD5 474 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 EDDM13A0A1B0GTR0 161 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 IQCMA0A1B0GVH7 501 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 METTL12A8MUP2 240 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 C1QTNF9BB2RNN3 333 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 TOR1BO14657 336 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PDPK1O15530 556 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 BNIP3LO60238 219 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 KDM1AO60341 852 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PRAMEF10O60809 474 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 MFN2O95140 757 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 PTHP01270 115 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 VIPP01282 170 aa10.19□□□□□ -0.78
RTN3-201ENST00000338850 STSP08842 583 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms