RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LINGO2Q7L985 606 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 RTN4RL1Q86UN2 441 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 OR56A1Q8NGH5 318 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 FYTTD1Q96QD9 318 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 ALOXE3Q9BYJ1 711 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 RANBP3Q9H6Z4 567 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 MID1O15344 667 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PRKYO43930 277 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 RLN1P04808 185 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CLEC2LP0C7M8 214 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 IMPA1P29218 277 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CLCNKAP51800 687 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 RPA4Q13156 261 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 NTRK2Q16620 822 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PAMR1Q6UXH9 720 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 OOSP2Q86WS3 158 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 KIAA1958Q8N8K9 716 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 TTLQ8NG68 377 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 SETD7Q8WTS6 366 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 NR4A3Q92570 626 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CREB3L1Q96BA8 519 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM38AQ9H6F2 299 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 FZD6O60353 706 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 HPGDSO60760 199 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 ADH1CP00326 375 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 FURINP09958 794 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 APEX1P27695 318 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PDHA2P29803 388 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PSPHP78330 225 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 SF3A2Q15428 464 aaKnown RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 RASSF6Q6ZTQ3 369 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PDZD3Q86UT5 571 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 SUN3Q8TAQ9 357 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 SORCS1Q8WY21 1168 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 ACOT12Q8WYK0 555 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CHFRQ96EP1 664 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 CCDC3Q9BQI4 270 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 BRD7Q9NPI1 651 aa12.1□□□□□ -0.47
DNMT3A-202ENST00000321117 LOC102723532A0A0G2JNH3 316 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CHRNB1P11230 501 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 XCR1P46094 333 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 RAB40BQ12829 278 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 TRIM71Q2Q1W2 868 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 C1QTNF12Q5T7M4 302 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 BCL2L15Q5TBC7 163 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 PODNL1Q6PEZ8 512 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 FAM220AQ7Z4H9 259 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 BCDIN3DQ7Z5W3 292 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MEX3DQ86XN8 651 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 HORMAD2Q8N7B1 307 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 LMNTD1Q8N9Z9 388 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 C7orf34Q96L11 122 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 TMEM98Q9Y2Y6 226 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CCL27Q9Y4X3 112 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ANK1P16157 1881 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MN1Q10571 1320 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 TRBV5-4A0A0C4DH59 114 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 PROM1O43490 865 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 MT-ND5P03915 603 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 TRAPPC2P0DI81 140 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 TRAPPC2BP0DI82 140 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CFL1P23528 166 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 UQCRC1P31930 480 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 GCGRP47871 477 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 RPL6Q02878 288 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 SLAMF1Q13291 335 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ZNF267Q14586 743 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 KHDRBS2Q5VWX1 349 aaKnown RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ACBD7Q8N6N7 88 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 IL17RDQ8NFM7 739 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 OR2T33Q8NG76 320 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 CHTF18Q8WVB6 975 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 SLC35B4Q969S0 331 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 SPATA6Q9NWH7 488 aaPredicted RBP12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 RDH8Q9NYR8 311 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 H3BNC9 293 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 REM1O75628 298 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 SERPINA3P01011 423 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 GMFBP60983 142 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 NKX3-2P78367 333 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 GPR68Q15743 365 aa12.09□□□□□ -0.47
DNMT3A-202ENST00000321117 DUSP7Q16829 419 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms