RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PAK1IP1Q9NWT1 392 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-201ENST00000315286 BLOC1S6Q9UL45 172 aa17.28■□□□□ 0.36
CCDC43-201ENST00000315286 PTGES3LE9PB15 166 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 HCRTR1O43613 425 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 XPNPEP2O43895 674 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 CPNE6O95741 557 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 ANGPTL1O95841 491 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 CHRM4P08173 479 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 FMO3P31513 532 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 ANXA11P50995 505 aaKnown RBP17.27■□□□□ 0.36
CCDC43-201ENST00000315286 XKP51811 444 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 CRISP3P54108 245 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 GABARAPL2P60520 117 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 LSAMPQ13449 338 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 TCTN3Q6NUS6 607 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 GPR153Q6NV75 609 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 SPARTQ8N0X7 666 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 VANGL1Q8TAA9 524 aaPredicted RBP17.27■□□□□ 0.36
CCDC43-201ENST00000315286 PHF10Q8WUB8 498 aaKnown RBP17.27■□□□□ 0.36
CCDC43-201ENST00000315286 COL26A1Q96A83 441 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 EQTNQ9NQ60 294 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 KCND3Q9UK17 655 aa17.27■□□□□ 0.36
CCDC43-201ENST00000315286 A0A1W2PR77 199 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 ZSCAN9O15535 394 aaPredicted RBP17.27■□□□□ 0.35
CCDC43-201ENST00000315286 CCDC159P0C7I6 412 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 CD38P28907 300 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 PCSK6P29122 969 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 MAZP56270 477 aaKnown RBP17.27■□□□□ 0.35
CCDC43-201ENST00000315286 XAF1Q6GPH4 301 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 B3GNT8Q7Z7M8 397 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 HMGN2P46Q86SG4 172 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 COMTD1Q86VU5 262 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 OR4K14Q8NGD5 310 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 RASSF5Q8WWW0 418 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF566Q969W8 418 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 HRASLS5Q96KN8 279 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 ALPK1Q96QP1 1244 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 OR7D2Q96RA2 312 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 FANCEQ9HB96 536 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 BCL2L10Q9HD36 194 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 FAM60AQ9NP50 221 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 HCN4Q9Y3Q4 1203 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 SLC22A7Q9Y694 548 aa17.27■□□□□ 0.35
CCDC43-201ENST00000315286 CSF2P04141 144 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 ST6GAL1P15907 406 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF10P21506 573 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-201ENST00000315286 MAN2A2P49641 1150 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 VSX2P58304 361 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-201ENST00000315286 STARD6P59095 220 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 MAD2L1BPQ15013 274 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-201ENST00000315286 LEXMQ3ZCV2 418 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 KRT73Q86Y46 540 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 LACC1Q8IV20 430 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 RBM12BQ8IXT5 1001 aaKnown RBP17.26■□□□□ 0.35
CCDC43-201ENST00000315286 LRRC25Q8N386 305 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-201ENST00000315286 CSNK1A1LQ8N752 337 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 BBS10Q8TAM1 723 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 MPP4Q96JB8 637 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 STARD5Q9NSY2 213 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 MS4A12Q9NXJ0 267 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 POMT2Q9UKY4 750 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 CDC14AQ9UNH5 594 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 PCDHGA6Q9Y5G7 932 aa17.26■□□□□ 0.35
CCDC43-201ENST00000315286 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 CCNB2O95067 398 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 POU2F1P14859 743 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 JUNBP17275 347 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 TLX1P31314 330 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 GPAT3Q53EU6 434 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 COLEC12Q5KU26 742 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 C6orf132Q5T0Z8 1188 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 ARMC6Q6NXE6 501 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 OR7G2Q8NG99 324 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 GIMAP5Q96F15 307 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 LIN28AQ9H9Z2 209 aaKnown RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 NMNAT1Q9HAN9 279 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 RASSF1Q9NS23 344 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 FBXL21Q9UKT6 434 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 COLQQ9Y215 455 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 POFUT2Q9Y2G5 429 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 TRBV4-1A0A0J9YWV2 114 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 A8MVJ9 347 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 NME1P15531 152 aaKnown RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 MANEAQ5SRI9 462 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 FAM111BQ6SJ93 734 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 DEF8Q6ZN54 512 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 WDR53Q7Z5U6 358 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 ZNF655Q8N720 491 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-201ENST00000315286 OR5T3Q8NGG3 340 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 ISOC1Q96CN7 298 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 PSD2Q9BQI7 771 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 SEMA6CQ9H3T2 930 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 SLC24A3Q9HC58 644 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 LYRM4Q9HD34 91 aa17.25■□□□□ 0.35
CCDC43-201ENST00000315286 FAM227AF5H4B4 570 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 TLR4O00206 839 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CTSBP07858 339 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 CBLP22681 906 aa17.24■□□□□ 0.35
CCDC43-201ENST00000315286 TTKP33981 857 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms