RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 C6orf120Q7Z4R8 191 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TDRPQ86YL5 185 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CNTD1Q8N815 330 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MDGA1Q8NFP4 955 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 RAB7BQ96AH8 199 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 DDIT4LQ96D03 193 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 POLE4Q9NR33 117 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 EPHA6Q9UF33 1036 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 NSG1A0A0A6YYJ2 146 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF99A8MXY4 864 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 XPNPEP2O43895 674 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 SCRG1O75711 98 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 SLC16A8O95907 504 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 UQCRC2P22695 453 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 GJA4P35212 333 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 NR4A2P43354 598 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MAP2K4P45985 399 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 GINS1Q14691 196 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 GRM7Q14831 915 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MCATQ8IVS2 390 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 G6PC3Q9BUM1 346 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TCN2P20062 427 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 GCH1P30793 250 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 LSSP48449 732 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CTBSQ01459 385 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 KCNAB1Q14722 419 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 HERC3Q15034 1050 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF789Q5FWF6 425 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 FRMD7Q6ZUT3 714 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 OR52N2Q8NGI0 321 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 STON2Q8WXE9 905 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 H1FXQ92522 213 aaKnown RBP7.43□□□□□ -1.22
SCN9A-201ENST00000303354 BIRC7Q96CA5 298 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MYRFLQ96LU7 910 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CLSTN3Q9BQT9 956 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TAAR2Q9P1P5 351 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 NXPH3O95157 252 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 GSRP00390 522 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 MOGSQ13724 837 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 CNIH3Q8TBE1 160 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 C7orf26Q96N11 449 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 TM7SF3Q9NS93 570 aa7.43□□□□□ -1.22
SCN9A-201ENST00000303354 PGCP20142 388 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 NR1H2P55055 460 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 AP1S2P56377 157 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DPYSQ14117 519 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PRAMEF8Q5VWM4 474 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PRAMEF7Q5VXH5 474 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CEP76Q8TAP6 659 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SERINC2Q96SA4 455 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 RPL36Q9Y3U8 105 aaKnown RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ADGRB2O60241 1585 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PNMTP11086 282 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 MC3RP41968 323 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DCAF12Q5T6F0 453 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 RAB43Q86YS6 212 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 NIPA2Q8N8Q9 360 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 GPR26Q8NDV2 337 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SDR9C7Q8NEX9 313 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 HSD17B8Q92506 261 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 KLHL13Q9P2N7 655 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 RPH3ALQ9UNE2 315 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TIMP2P16035 220 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 RGS6P49758 472 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TLE3Q04726 772 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DEFB109BQ30KR1 87 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 KIAA0319Q5VV43 1072 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SLC7A7Q9UM01 511 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DHDHQ9UQ10 334 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 M0R129 80 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CHRM4P08173 479 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 XCR1P46094 333 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 MNX1P50219 401 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PCLAFQ15004 111 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 C9orf50Q5SZB4 431 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 MAMDC4Q6UXC1 1216 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ZNF689Q96CS4 500 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-201ENST00000303354 UNC119BA6NIH7 251 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 AGR2O95994 175 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TDGQ13569 410 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CDS1Q92903 461 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ST6GALNAC5Q9BVH7 336 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DPH1Q9BZG8 443 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 OBP2BQ9NPH6 170 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 EMC8O43402 210 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM225BP0DP42 221 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ATF6P18850 670 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 DEFA5Q01523 94 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 NDUFAF5Q5TEU4 345 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 SCD5Q86SK9 330 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 PPP1R3BQ86XI6 285 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ALDH16A1Q8IZ83 802 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 ARFGAP1Q8N6T3 406 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 CYB561A3Q8NBI2 242 aa7.42□□□□□ -1.22
SCN9A-201ENST00000303354 EDAQ92838 391 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms