RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RSPRY1Q96DX4 576 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 TEFMQ96QE5 360 aaKnown RBP23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 GLIPR2Q9H4G4 154 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 KLHL31Q9H511 634 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 TXNL4BQ9NX01 149 aaKnown RBP23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 TBC1D14Q9P2M4 693 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 SSR3Q9UNL2 185 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 PIPP12273 146 aaPredicted RBP23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 TIE1P35590 1138 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 MAPK9P45984 424 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 RUNX1T1Q06455 604 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 LASP1Q14847 261 aaKnown RBP23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 AMZ2Q86W34 360 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 UBQLNLQ8IYU4 475 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 ZG16BQ96DA0 208 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 C1GALT1C1Q96EU7 318 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 EQTNQ9NQ60 294 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF221Q9UK13 617 aa23.05■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF670-ZNF695F2Z2N8 137 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 SEMA3DO95025 777 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 ADH5P11766 374 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 SDC2P34741 201 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 RPS25P62851 125 aaKnown RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 PSPHP78330 225 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 LARS2Q15031 903 aaKnown RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 NCF4Q15080 339 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 C9orf64Q5T6V5 341 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 LCTLQ6UWM7 567 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF517Q6ZMY9 492 aaPredicted RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 TM9SF4Q92544 642 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 C16orf58Q96GQ5 468 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 NELL2Q99435 816 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 TTYH2Q9BSA4 534 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 EPHX3Q9H6B9 360 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 KLHL20Q9Y2M5 609 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 A0A075B6Q4 140 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 A0A1W2PQL4 384 aaPredicted RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 MSL3P1P0C860 447 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 KELP23276 732 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 INSL4Q14641 139 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 AIF1LQ9BQI0 150 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 DPH7Q9BTV6 452 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 TRMT61BQ9BVS5 477 aaKnown RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 OSGEPL1Q9H4B0 414 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 PAK6Q9NQU5 681 aaPredicted RBP23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 CNIH4Q9P003 139 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 SEC14L4Q9UDX3 406 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 HCN2Q9UL51 889 aa23.04■■□□□ 1.28
SPTSSA-201ENST00000298130 ARRDC5A6NEK1 342 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 IDH3BO43837 385 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 CLCNKAP51800 687 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 TP53I13Q8NBR0 393 aaPredicted RBP23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 SLC35G5Q96KT7 338 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF607Q96SK3 696 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 MIXL1Q9H2W2 232 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 MAN2C1Q9NTJ4 1040 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 NDUFB11Q9NX14 153 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 LINC00271P0C7V0 271 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 GJA8P48165 433 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 GIPRP48546 466 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 MNX1P50219 401 aaPredicted RBP23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 NCBP2P52298 156 aaKnown RBP eCLIP23.03■■□□□ 1.281e-17■□□□□ 10
SPTSSA-201ENST00000298130 DUSP2Q05923 314 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 NDUFAF5Q5TEU4 345 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 PDZD3Q86UT5 571 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 GLCCI1Q86VQ1 547 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 SETD7Q8WTS6 366 aaKnown RBP23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 DIRAS2Q96HU8 199 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF582Q96NG8 517 aaPredicted RBP23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 CCDC32Q9BV29 185 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 AICDAQ9GZX7 198 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 FBXW2Q9UKT8 454 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 MAFFQ9ULX9 164 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 NTNG1Q9Y2I2 539 aa23.03■■□□□ 1.28
SPTSSA-201ENST00000298130 HYKKA2RU49 373 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 NDUFS4O43181 175 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 PRNPP04156 253 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 CHRM4P08173 479 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 CCL5P13501 91 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 SOX18P35713 384 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 GPR50Q13585 617 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 ZNF793Q6ZN11 406 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 LHFPL3Q86UP9 236 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 KRT73Q86Y46 540 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 KIF18BQ86Y91 864 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 DCUN1D3Q8IWE4 304 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 CCDC116Q8IYX3 515 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 LINC01555Q8NAE3 123 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 FLCNQ8NFG4 579 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 SRRQ9GZT4 340 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 DPEP2Q9H4A9 486 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 PLSCR3Q9NRY6 295 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 CMAHPQ9Y471 501 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 OR1A2Q9Y585 309 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 MYO10Q9HD67 2058 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 HEATR5BQ9P2D3 2071 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 VCANP13611 3396 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 PGRMC2O15173 223 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 SSR2P43308 183 aa23.02■■□□□ 1.28
SPTSSA-201ENST00000298130 HTRA3P83110 453 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms