RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ARHGEF39Q8N4T4 335 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 CAMKK1Q8N5S9 505 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 OR4K14Q8NGD5 310 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 OR4D11Q8NGI4 311 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 LMX1AQ8TE12 382 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 PROX1Q92786 737 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 KAT2AQ92830 837 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 CLDN23Q96B33 292 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 UCK1Q9HA47 277 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 IL21RQ9HBE5 538 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 SEC14L3Q9UDX4 400 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 GMPPBQ9Y5P6 360 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 KCNE3Q9Y6H6 103 aa15.63■□□□□ 0.09
CCDC40-201ENST00000269318 PCDH17O14917 1159 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 GALR3O60755 368 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 UBXN7O94888 489 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 ANXA8P13928 327 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 FOSL2P15408 326 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 SOX18P35713 384 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 VSX2P58304 361 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 TOP3AQ13472 1001 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 GANABQ14697 944 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 PUS10Q3MIT2 529 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 PRAMEF8Q5VWM4 474 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 PRAMEF7Q5VXH5 474 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 TCTN3Q6NUS6 607 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 KCTD8Q6ZWB6 473 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 COMTD1Q86VU5 262 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 C17orf82Q86X59 251 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 CCDC71Q8IV32 467 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 AVL9Q8NBF6 648 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 OR7G2Q8NG99 324 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 SGCDQ92629 289 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 ZNF566Q969W8 418 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 HSPA12BQ96MM6 686 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 OR7D2Q96RA2 312 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 WFDC6Q9BQY6 131 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 TBC1D17Q9HA65 648 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 NAALAD2Q9Y3Q0 740 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 COMMD3-BMI1R4GMX3 469 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 SLC1A7O00341 560 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 CYR61O00622 381 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 KIF1CO43896 1103 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 GADD45GO95257 159 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 NXPH1P58417 271 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 IL5RAQ01344 420 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 COL9A2Q14055 689 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 GNA13Q14344 377 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 ZBED5Q49AG3 693 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 FAM111BQ6SJ93 734 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 TSPYL5Q86VY4 417 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 KRT73Q86Y46 540 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 OR4N5Q8IXE1 308 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 C19orf47Q8N9M1 422 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 OR5T3Q8NGG3 340 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 CNIH3Q8TBE1 160 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 NMD3Q96D46 503 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 DHRS1Q96LJ7 313 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 BTBD2Q9BX70 525 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 MIR1-1HGQ9H1L0 117 aa15.62■□□□□ 0.09
CCDC40-201ENST00000269318 PAPOLBQ9NRJ5 636 aaKnown RBP15.62■□□□□ 0.09
CCDC40-201ENST00000269318 ARRDC5A6NEK1 342 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CPNE6O95741 557 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 EPPINO95925 133 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CTSBP07858 339 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 HTR1AP08908 422 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CCDC159P0C7I6 412 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CPMP14384 443 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 EEF1B2P24534 225 aaKnown RBP15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CAPZBP47756 277 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 RPP38P78345 283 aaKnown RBP15.61■□□□□ 0.09
CCDC40-201ENST00000269318 ZP2Q05996 745 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 PMS2P3Q13401 168 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 BROXQ5VW32 411 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 GPR141Q7Z602 305 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 RBM45Q8IUH3 476 aaKnown RBP15.61■□□□□ 0.09
CCDC40-201ENST00000269318 LACC1Q8IV20 430 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 CA13Q8N1Q1 262 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 OR2L13Q8N349 312 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 TMEM52Q8NDY8 209 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 OR9Q2Q8NGE9 314 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 HRASLS5Q96KN8 279 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 GUCD1Q96NT3 240 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 APOL4Q9BPW4 351 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 NIPSNAP1Q9BPW8 284 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 ACTRT3Q9BYD9 372 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 POLR1BQ9H9Y6 1135 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 EQTNQ9NQ60 294 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 STARD5Q9NSY2 213 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 RHCGQ9UBD6 479 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 ACAD8Q9UKU7 415 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 BLOC1S6Q9UL45 172 aa15.61■□□□□ 0.09
CCDC40-201ENST00000269318 DSPPQ9NZW4 1301 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 A0A0G2JPF8 293 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 CCDC160A6NGH7 325 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 LILRA5A6NI73 299 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 HNRNPCL2B2RXH8 293 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 HNRNPCL3B7ZW38 293 aa15.6■□□□□ 0.09
CCDC40-201ENST00000269318 ABCB7O75027 752 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms