RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 COL9A3Q14050 684 aaPredicted RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 HACD2Q6Y1H2 254 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 OR10G2Q8NGC3 310 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 OR1J4Q8NGS1 313 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 UFD1Q92890 307 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 YTHDF1Q9BYJ9 559 aaKnown RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ADAM18Q9Y3Q7 739 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 A0A1W2PPH5 198 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 DSCR3O14972 297 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ACOX3O15254 700 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 CSO75390 466 aaKnown RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ARL6IP5O75915 188 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 TNFSF15O95150 251 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 TCF4P15884 667 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 IRF9Q00978 393 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 TTMPQ5BVD1 217 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 EBF1Q9UH73 591 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 RNASET2O00584 256 aaKnown RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 PDE5AO76074 875 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 SDC2P34741 201 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 IDUAP35475 653 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 HLA-BQ31612 363 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ANKDD1AQ495B1 522 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF648Q5T619 568 aaPredicted RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 CEP97Q8IW35 865 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 OR51Q1Q8NH59 317 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 NFKBIDQ8NI38 313 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 LRRC58Q96CX6 371 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 DUSP15Q9H1R2 295 aaPredicted RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 AQP1P29972 269 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 DLSTP36957 453 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 DGKQP52824 942 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 RDH12Q96NR8 316 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 MEAF6Q9HAF1 191 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 NAALAD2Q9Y3Q0 740 aa12.74□□□□□ -0.37
PRPF38A-201ENST00000257181 LRP3O75074 770 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 NME1P15531 152 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 S100A7P31151 101 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 MAN2A2P49641 1150 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 GDI2P50395 445 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CORO7P57737 925 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC25A3Q00325 362 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 MLC1Q15049 377 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 LAPTM4BQ86VI4 370 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 MORN4Q8NDC4 146 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 OR11L1Q8NGX0 322 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 COG8Q96MW5 612 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 OR51I1Q9H343 314 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 UBQLN4Q9NRR5 601 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 QSER1Q2KHR3 1735 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 UNC119BA6NIH7 251 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 RGS10O43665 173 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ATG12O94817 140 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 PSMA1P25786 263 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC10A2Q12908 348 aaPredicted RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 RIPK1Q13546 671 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 NDUFAF5Q5TEU4 345 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 GRAMD2AQ8IUY3 354 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 OR52N2Q8NGI0 321 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ASB11Q8WXH4 323 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CAMK2AQ9UQM7 478 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 PCDHB14Q9Y5E9 798 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 IL1RNP18510 177 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 FPR1P21462 350 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CTGFP29279 349 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 PYCR3Q53H96 274 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ZDHHC24Q6UX98 284 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CD200R1Q8TD46 325 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 COPS4Q9BT78 406 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF860A6NHJ4 632 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CYB5BO43169 146 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 KDM4BO94953 1096 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 AOC1P19801 751 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 CFL1P23528 166 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 THBS2P35442 1172 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 NR0B1P51843 470 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 MAZP56270 477 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 HYAL2Q12891 473 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC34A3Q8N130 599 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 ENDOVQ8N8Q3 282 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 MAGIXQ9H6Y5 334 aa12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 PAK1IP1Q9NWT1 392 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms