RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 LAMP2P13473 410 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 CDH11P55287 796 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 OR2B6P58173 313 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 SCN1BQ07699 218 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 C22orf42Q6IC83 251 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC27A4Q6P1M0 643 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 PODNL1Q6PEZ8 512 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 WDR53Q7Z5U6 358 aaPredicted RBP14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 LHFPL3Q86UP9 236 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 RAB43Q86YS6 212 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 ZFP41Q8N8Y5 198 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 FBXO15Q8NCQ5 510 aaPredicted RBP14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 ITFG2Q969R8 447 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 RERGQ96A58 199 aaPredicted RBP14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 PDXPQ96GD0 296 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 KCTD7Q96MP8 289 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 TRNT1Q96Q11 434 aaKnown RBP14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 TBX5Q99593 518 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 SMURF1Q9HCE7 757 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 ZSCAN32Q9NX65 697 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 MAT2BQ9NZL9 334 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 IL20RAQ9UHF4 553 aa14.16□□□□□ -0.14
UBE2D4-201ENST00000222402 URADA6NGE7 173 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 WASHC1A8K0Z3 465 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 NPIPB8E9PQR5 432 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 IDH3BO43837 385 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 SAGP10523 405 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 RNF144AP50876 292 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 COPZ1P61923 177 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ST3GAL3Q11203 375 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 HNRNPA0Q13151 305 aaKnown RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 DDI2Q5TDH0 399 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 LAIR1Q6GTX8 287 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CDC73Q6P1J9 531 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 WASH2PQ6VEQ5 465 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CCDC71Q8IV32 467 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 RNFT2Q96EX2 444 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 INSM2Q96T92 566 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 LGR4Q9BXB1 951 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 IRGMA1A4Y4 181 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF860A6NHJ4 632 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 PPM1DO15297 605 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 RAB36O95755 333 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CERS1P27544 350 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 TALDO1P37837 337 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 HOXC5Q00444 222 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF91Q05481 1191 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 PARP16Q8N5Y8 322 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 RFKQ969G6 155 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CNOT2Q9NZN8 540 aaKnown RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CKAP5Q14008 2032 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 METTL15A6NJ78 407 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 TMPRSS11DO60235 418 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 SLITRK5O94991 958 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 FHP07954 510 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 PRDX1Q06830 199 aaKnown RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 MAP4K2Q12851 820 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF776Q68DI1 518 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF547Q8IVP9 402 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 OR4N5Q8IXE1 308 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 GJD3Q8N144 294 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 FAM83FQ8NEG4 500 aaPredicted RBP14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 MCHR1Q99705 422 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 YIPF2Q9BWQ6 316 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 OR52A5Q9H2C5 316 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 PRSS16Q9NQE7 514 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 CNIH4Q9P003 139 aa14.15□□□□□ -0.14
UBE2D4-201ENST00000222402 ELAVL4P26378 380 aaKnown RBP14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 STEAP3Q658P3 488 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 HSDL2Q6YN16 418 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 LINC00471Q8N535 108 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 ACOT4Q8N9L9 421 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 APH1BQ8WW43 257 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 DMRTB1Q96MA1 342 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 ZNF221Q9UK13 617 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 SNX7Q9UNH6 387 aa14.15□□□□□ -0.15
UBE2D4-201ENST00000222402 TRPM6Q9BX84 2022 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 WWP2O00308 870 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 HOXC11O43248 304 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 ARHGEF9O43307 516 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 NKX2-5P52952 324 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 MESP2Q0VG99 397 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 TRAM2Q15035 370 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 ZNF750Q32MQ0 723 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 CADM3Q8N126 398 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 GATAD2BQ8WXI9 593 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 TMED9Q9BVK6 235 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 FBXO8Q9NRD0 319 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 PLCXD1Q9NUJ7 323 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 CLEC2DQ9UHP7 191 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 ADAM30Q9UKF2 790 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 WDR45Q9Y484 360 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 OR10H2O60403 315 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 MOSPD3O75425 235 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 MC3RP41968 323 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 NCCRP1Q6ZVX7 275 aaPredicted RBP14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 FCRL1Q96LA6 429 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 DEPDC7Q96QD5 511 aa14.14□□□□□ -0.15
UBE2D4-201ENST00000222402 PRR14Q9BWN1 585 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms