RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 EloaQ8CB77 773 aaKnown RBP15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slfn5Q8CBA2 884 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 St3gal5O88829 414 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Alkbh2Q6P6J4 239 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Pramef25A2ASI9 494 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r15L7N2A0 855 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 SpnP15702 395 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 TesP47226 423 aaKnown RBP15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr744Q7TRM0 323 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ndufb10Q9DCS9 176 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Hbb-yP02104 147 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Sox14Q04892 240 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Pag1Q3U1F9 429 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Syt14Q7TN84 555 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 MslnlQ8C160 685 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dbf4Q9QZ41 663 aa15.93■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 4930544D05RikJ3QK56 214 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tead2P48301 445 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Serpinf2Q61247 491 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slitrk5Q810B7 957 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slc41a2Q8BYR8 573 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Actr1bQ8R5C5 376 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Armc10Q9D0L7 306 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr701Q9D3U9 316 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ighv11-1A0A075B5R6 117 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mamld1P0C6A2 803 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 RpiaP47968 303 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 AbatP61922 500 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 InhaQ04997 366 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ostm1Q8BGT0 338 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Necab3Q9D6J4 353 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dtwd1Q9D8U7 304 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Slco1a4Q9EP96 670 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm11127A7VMS2 374 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm6133B2RY53 190 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r45L7N2B5 852 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tmem252Q8C353 183 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 NrmQ8VC65 262 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Fndc8Q9D2H8 321 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 D7h11orf16Q9JJR6 402 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Sorcs1Q9JLC4 1167 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Lamb1P02469 1786 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm29106A0A087WSP8 697 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr1193A2AV13 318 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ppt1O88531 306 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Olfr328Q5NCD3 310 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Alg8Q6P8H8 526 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Zfp874aQ8BX23 447 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Peli3Q8BXR6 445 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mtfr2Q8VED8 361 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Alg14Q9D081 217 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Fibcd1A2AV25 459 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm2075J3QMW5 144 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 F9P16294 471 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Bdkrb2P32299 392 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gsc2P56916 198 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 C2cd4cC2CD4Q5HZI2 419 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Bdkrb1Q61125 334 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Usb1Q91W78 267 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Pcdhga12Q91XY7 932 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Polr2hQ923G2 150 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ccdc107Q9DCC3 242 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Fbxl12Q9EPX5 326 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Clcf1Q9QZM3 225 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Zfp68Q9Z116 606 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vmn2r110E9PWD5 858 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Vipr1P97751 459 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 OgdhQ60597 1023 aaKnown RBP15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Acat3Q80X81 397 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Fbxl3Q8C4V4 428 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 CpzQ8R4V4 654 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dok4Q99KE3 325 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ralgps2Q9ERD6 590 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cacna1iE9Q7P2 2199 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Cyp2j5O54749 501 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 RngttO55236 597 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 C1qbP14106 253 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tram1l1Q8QZR0 363 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Mageh1Q9NWG9 218 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Hebp2Q9WU63 205 aa15.92■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Btbd16E9Q173 522 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Syt3O35681 587 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Hcn3O88705 779 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tp63O88898 680 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Pmp22P16646 161 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gm7030Q0WXH6 285 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Nell1Q2VWQ2 810 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ermp1Q3UVK0 898 aaKnown RBP15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Tas2r140Q7TQA4 312 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Gpr89aQ8BS95 455 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Amigo3Q8C2S7 508 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Alg2Q9DBE8 415 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Zfp37P17141 594 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Dsc3P55850 896 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Kcnj13P86046 360 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ndrg1Q62433 394 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 IlvblQ8BU33 632 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Ppp2r2dQ925E7 453 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 NepnQ9CQ76 512 aa15.91■□□□□ 0.14
Ccdc88a-201ENSMUST00000040182 Bace2Q9JL18 514 aa15.91■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms