RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Vmn1r16K7N775 303 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 IgfalsP70389 603 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 VaspP70460 375 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Elavl3Q60900 367 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tpgs2Q66JT5 296 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ugt2a2Q6PDD0 528 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Znf516Q7TSH3 1157 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Acat3Q80X81 397 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Txnl4bQ8BUH1 149 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Lsm14aQ8K2F8 462 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr791Q8VGJ0 312 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tram2Q924Z5 370 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slc22a30Q96LX3 552 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Hspb11Q9D6H2 143 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ccdc3Q9D6Y1 273 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 2200002D01RikQ9D809 114 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Aif1lQ9EQX4 150 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dctn3Q9Z0Y1 186 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tet2Q4JK59 1912 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Bmp4P21275 408 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tas2r7P59530 312 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zfp280bQ505F4 534 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 NanogQ80Z64 305 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Fbxl21Q8BFZ4 434 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Q8C0X8 640 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pqlc3Q8C6U2 202 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 EloaQ8CB77 773 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr689Q8VG18 320 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr551Q8VG23 315 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dus3lQ91XI1 637 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Uck2Q99PM9 261 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ube2fQ9CY34 185 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Q9D1F3 157 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Exosc1Q9DAA6 195 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Unc80Q8BLN6 3261 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Igkv4-86A0A0G2JGE7 114 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ap1arE9PYF7 298 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Nthl1O35980 300 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Zfp28P10078 825 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Nudt19P11930 357 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slc16a3P57787 470 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 C1qaP98086 245 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ppp3r2Q63811 179 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Otub1Q7TQI3 271 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Slc38a9Q8BGD6 560 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Nipal3Q8BGN5 410 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 NarsQ8BP47 559 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cnot2Q8C5L3 540 aaKnown RBP14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Ccdc187Q8C5V8 958 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rpp25Q91WE3 199 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Rpe65Q91ZQ5 533 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dnase1l1Q9D7J6 314 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Jph1Q9ET80 660 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Serpini2Q9JK88 405 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Spo11Q9WTK8 396 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Lhx9Q9WUH2 397 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Mapk11Q9WUI1 364 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Creb3l1Q9Z125 519 aa14.28□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cd300ld4A2A7W1 245 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm6710A2ART0 554 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Gm2956E9PVJ0 216 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 2610001J05RikF2Z3Y9 59 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Vmn2r93L7N1Z9 857 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Anxa3O35639 323 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 TstP52196 297 aaKnown RBP14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 EvlP70429 414 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pde12Q3TIU4 608 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 BC061212Q6P8K3 481 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Dlgap3Q6PFD5 977 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cd300ld3Q6SJQ5 245 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr744Q7TRM0 323 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Mblac1Q8BWY4 260 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Yipf4Q8C407 246 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Agbl3Q8CDP0 1006 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Mapre2Q8R001 326 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmem179bQ9CY24 219 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Naalad2Q9CZR2 740 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Pex13Q9D0K1 405 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Tmed10Q9D1D4 219 aaKnown RBP14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Cts6Q9ET52 334 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 PolmQ9JIW4 496 aa14.27□□□□□ -0.12
Nkx3-1-201ENSMUST00000022646 Olfr171G5E8J1 314 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 CtssO70370 340 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Efna1P52793 205 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 JupQ02257 745 aaKnown RBP14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Acss3Q14DH7 682 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Awat2Q6E1M8 333 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 PeloQ80X73 385 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Slc25a24Q8BMD8 475 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Vmn1r75Q8R289 305 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Gtf2h3Q8VD76 309 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Olfr700Q8VFM5 316 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Tcf19Q99KJ5 263 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Pfn3Q9DAD6 137 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Isoc2bQ9DCC7 210 aa14.27□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Slfn3A0A1L1STQ7 640 aa14.26□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Xlr5aA2BI45 236 aa14.26□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Atp6ap1lD3Z5W0 336 aa14.26□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Prr36E9PV26 1098 aa14.26□□□□□ -0.13
Nkx3-1-201ENSMUST00000022646 Kcnmb3E9Q7U0 239 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms