RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SMPDL3AQ92484 453 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 TM4SF18Q96CE8 201 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 PDXPQ96GD0 296 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 OR2A14Q96R47 310 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 SGPP1Q9BX95 441 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 ZDHHC5Q9C0B5 715 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 CNIH4Q9P003 139 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 TBC1D14Q9P2M4 693 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 RPL36Q9Y3U8 105 aaKnown RBP13.83□□□□□ -0.2
SCARB2-221ENST00000640341 SZT2Q5T011 3432 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 HEPACAM2A8MVW5 462 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 SOD1P00441 154 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 ADAP00813 363 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 EPHX1P07099 455 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 KRR1Q13601 381 aaKnown RBP13.83□□□□□ -0.2
SCARB2-221ENST00000640341 TBRG1Q3YBR2 411 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 ASB15Q8WXK1 588 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 SLC6A18Q96N87 628 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF607Q96SK3 696 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 PHOX2BQ99453 314 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 MND1Q9BWT6 205 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 CNOT2Q9NZN8 540 aaKnown RBP13.83□□□□□ -0.2
SCARB2-221ENST00000640341 REV1Q9UBZ9 1251 aa13.83□□□□□ -0.2
SCARB2-221ENST00000640341 IL7P13232 177 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 MYL12AP19105 171 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ETV5P41161 510 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ETV1P50549 477 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 GPR19Q15760 415 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NLRP8Q86W28 1048 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 TRIM69Q86WT6 500 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 RAB43Q86YS6 212 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 JPH3Q8WXH2 748 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NACC2Q96BF6 587 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 BBS4Q96RK4 519 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NELL2Q99435 816 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 TBC1D17Q9HA65 648 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 IMP3Q9NV31 184 aaKnown RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ITGB8P26012 769 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 LIMS1P48059 325 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 SLC6A11P48066 632 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 CLCNKAP51800 687 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NCBP2P52298 156 aaKnown RBP eCLIP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 HMGA2P52926 109 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 SLC39A5Q6ZMH5 540 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 PHC2Q8IXK0 858 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 CCDC116Q8IYX3 515 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 OR6T1Q8NGN1 323 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 OR8J1Q8NGP2 316 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ARRDC3Q96B67 414 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NECTIN4Q96NY8 510 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 DEPDC7Q96QD5 511 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 GPA33Q99795 319 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 ZBP1Q9H171 429 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 PLSCR3Q9NRY6 295 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 NUFIP1Q9UHK0 495 aaKnown RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 FBXW2Q9UKT8 454 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 HELZP42694 1942 aaKnown RBP13.82□□□□□ -0.2
SCARB2-221ENST00000640341 PLXND1Q9Y4D7 1925 aa13.82□□□□□ -0.2
SCARB2-221ENST00000640341 A0A1W2PS29 197 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 PRRT4C9JH25 899 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 MMP11P24347 488 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 HTR3AP46098 478 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 KRT33BQ14525 404 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 INSL4Q14641 139 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 DHCR24Q15392 516 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ABI3BPQ7Z7G0 1075 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 GLCCI1Q86VQ1 547 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 AMZ2Q86W34 360 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 UBE2E3Q969T4 207 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 AIF1LQ9BQI0 150 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 LGR4Q9BXB1 951 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 CENPXA8MT69 81 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 E9PQ18 207 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 PCDH8O95206 1070 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 PPP2R1BP30154 601 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 CRYBB2P43320 205 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 RAB25P57735 213 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 WDR5P61964 334 aaKnown RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 DEFB115Q30KQ5 88 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF544Q6NX49 715 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 CCDC80Q76M96 950 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 TMCO6Q96DC7 493 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 PAQR5Q9NXK6 330 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 STUB1Q9UNE7 303 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 MGAT4BQ9UQ53 548 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 OR1A2Q9Y585 309 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 CPSF4LA6NMK7 179 aaKnown RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 NCR1O76036 304 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 SRPRAP08240 638 aaKnown RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-221ENST00000640341 AVPR1BP47901 424 aa13.81□□□□□ -0.2
SCARB2-221ENST00000640341 ZNF79Q15937 498 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms