RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZDHHC1Q8WTX9 485 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TBC1D20Q96BZ9 403 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SFXN2Q96NB2 322 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FAM210AQ96ND0 272 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MCHR1Q99705 422 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CDC6Q99741 560 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GINS3Q9BRX5 216 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MADDQ8WXG6 1647 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 URB1O60287 2271 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DLGAP1O14490 977 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MTX2O75431 263 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ADAP00813 363 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 LCATP04180 440 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C8BP07358 591 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FUT4P22083 530 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 AK4P27144 223 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DAP3P51398 398 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 NKX3-2P78367 333 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ANKDD1AQ495B1 522 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 LIPJQ5W064 366 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TXNDC8Q6A555 127 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 NPAS3Q8IXF0 933 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RNF175Q8N4F7 328 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR4N2Q8NGD1 307 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 NTAN1Q96AB6 310 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TCEAL4Q96EI5 215 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TAS2R8Q9NYW2 309 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FAM149AA5PLN7 773 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GLOD5A6NK44 160 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SCO1O75880 301 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 NPPAP01160 153 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MRPL3P09001 348 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ADRB3P13945 408 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 IL3RAP26951 378 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FNTBP49356 437 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RPL26P61254 145 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLC14A2Q15849 920 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM205Q6UW68 189 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SUSD1Q6UWL2 747 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RBMS3Q6XE24 437 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ATOH1Q92858 354 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 BSCL2Q96G97 398 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C7orf34Q96L11 122 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 NELL2Q99435 816 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLCO1B3Q9NPD5 702 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SCML1Q9UN30 329 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 INSL5Q9Y5Q6 135 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TRBV2A0A0J9YWF9 115 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 F5H0A9 414 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 BOLA2-SMG1P6H3BVE0 249 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 PDLIM1O00151 329 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SOCS2O14508 198 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FSCN2O14926 492 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 EDF1O60869 148 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CNTN5O94779 1100 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR8U9P0C7N5 309 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CREB1P16220 341 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SOX2P48431 317 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MVKQ03426 396 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR4F3Q6IEY1 312 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ARHGAP11AQ6P4F7 1023 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 UGT2A3Q6UWM9 527 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TICAM1Q8IUC6 712 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR1S1Q8NH92 325 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SCAMP5Q8TAC9 235 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FRZBQ92765 325 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TAMM41Q96BW9 452 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SDSLQ96GA7 329 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MSLNLQ96KJ4 702 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR5B2Q96R09 309 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLC30A2Q9BRI3 323 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR10A5Q9H207 317 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR10A2Q9H208 303 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ENAMQ9NRM1 1142 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 IGSF9Q9P2J2 1179 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SRRDQ9UH36 339 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 A0A0U1RQK1 487 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CRYM-AS1A6NIL9 109 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C9JVG2 144 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MEN1O00255 615 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C6orf47O95873 294 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 PAHP00439 452 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MMP2P08253 660 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 HLA-EP13747 358 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 KITLGP21583 273 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ARL2P36404 184 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 PRKXP51817 358 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 KCNC4Q03721 635 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 EIF2B1Q14232 305 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ATXN7L3Q14CW9 347 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SMYD5Q6GMV2 418 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ADGRD1Q6QNK2 874 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 PAQR3Q6TCH7 311 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 FCRL5Q96RD9 977 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SNX18Q96RF0 628 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms