RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
SOX2-OT-241ENST00000626948 CES1P1Q9UKY3 287 aa12.43□□□□□ -0.42
SOX2-OT-241ENST00000626948 ANGPTL3Q9Y5C1 460 aa12.43□□□□□ -0.42
SOX2-OT-241ENST00000626948 NF1P21359 2839 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 BCKDKO14874 412 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 CLDN9O95484 217 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 HOXD4P09016 255 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 SLC35E2P0CK97 266 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 TSPAN8P19075 237 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 GALNSP34059 522 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 BUD31P41223 144 aaPredicted RBP12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 MAN2A2P49641 1150 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 SERPINB8P50452 374 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 WNT3P56703 355 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 FBXW4P57775 412 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 FUT7Q11130 342 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 SNTB1Q13884 538 aaKnown RBP12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 POMZP3Q6PJE2 187 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 PAOXQ6QHF9 649 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 RNF111Q6ZNA4 994 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 CCDC91Q7Z6B0 441 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 EID3Q8N140 333 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 SLC15A4Q8N697 577 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 DCAKDQ8WVC6 231 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 RIT1Q92963 219 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 ZFP64Q9NPA5 681 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 XPR1Q9UBH6 696 aa12.42□□□□□ -0.42
SOX2-OT-241ENST00000626948 TRGV5A0A0B4J1U4 118 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 HCN1O60741 890 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 SEMA3DO95025 777 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 ACSL3O95573 720 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 KLK1P06870 262 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 RPS17P08708 135 aaKnown RBP12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 CTAGE8P0CG41 777 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 GCAP28676 217 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 TRPC1P48995 793 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 GALNT1Q10472 559 aaPredicted RBP12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 BIKQ13323 160 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 FRG2Q64ET8 278 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 C8orf74Q6P047 294 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 FAM180BQ6P0A1 224 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 B3GNT6Q6ZMB0 384 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 ACAD11Q709F0 780 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 CDH24Q86UP0 819 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 NUDT13Q86X67 352 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 CTAGE4Q8IX94 777 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 OR4F6Q8NGB9 312 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 SLC22A8Q8TCC7 542 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 ART5Q96L15 291 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 FRG2BQ96QU4 278 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 UBQLN3Q9H347 655 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 ACKR4Q9NPB9 350 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 KCNJ16Q9NPI9 418 aa12.41□□□□□ -0.42
SOX2-OT-241ENST00000626948 SETD2Q9BYW2 2564 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 IQANK1A0A1B0GTG1 560 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 OR6C76A6NM76 312 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 STX16O14662 325 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 OR10H2O60403 315 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 CAPN3P20807 821 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 TLX1P31314 330 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 CDH13P55290 713 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 KCNJ2P63252 427 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 TBL3Q12788 808 aaKnown RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 C1orf185Q5T7R7 199 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 METTL2BQ6P1Q9 378 aaKnown RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 FAM111BQ6SJ93 734 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 CYP20A1Q6UW02 462 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 SLC29A4Q7RTT9 530 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 ULK2Q8IYT8 1036 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 PRR22Q8IZ63 422 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 METTL4Q8N3J2 472 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 RELL2Q8NC24 303 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 OR10Q1Q8NGQ4 319 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 NEIL3Q8TAT5 605 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 ZNF483Q8TF39 744 aaPredicted RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 CHTF18Q8WVB6 975 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 REPS1Q96D71 796 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 HBEGFQ99075 208 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 PRM3Q9NNZ6 103 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 CNIH4Q9P003 139 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 ACAD8Q9UKU7 415 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 L3MBTL1Q9Y468 752 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 TNPO3Q9Y5L0 923 aaKnown RBP12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 NPFFR2Q9Y5X5 522 aa12.4□□□□□ -0.42
SOX2-OT-241ENST00000626948 AKAP6Q13023 2319 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 MTORP42345 2549 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 C2orf92A0A1B0GVN3 265 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 ANKRD33BA6NCL7 494 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 FIGNL2A6NMB9 653 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 A8MT66 165 aa12.39□□□□□ -0.43
SOX2-OT-241ENST00000626948 B4DXG7 233 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms