RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 MPIP34949 423 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 RPL5P46777 297 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 EMP3P54852 163 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 UBE2IP63279 158 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 ADPRMQ3LIE5 342 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 NADK2Q4G0N4 442 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 SHQ1Q6PI26 577 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 DEF8Q6ZN54 512 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 VASH1Q7L8A9 365 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 OR5T3Q8NGG3 340 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PROX1Q92786 737 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 C16orf58Q96GQ5 468 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 OR2A5Q96R48 311 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 CSF3RQ99062 836 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 CD320Q9NPF0 282 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 LYARQ9NX58 379 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 SEC14L3Q9UDX4 400 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 METTL12A8MUP2 240 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 TLR4O00206 839 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 B4GAT1O43505 415 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 B4GALT2O60909 372 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 C7P10643 843 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 POU2F1P14859 743 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ST6GAL1P15907 406 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 FPR1P21462 350 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ZNF10P21506 573 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 ALDH4A1P30038 563 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 TLX1P31314 330 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 FAM209AQ5JX71 171 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 TTC23Q5W5X9 447 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 SLC48A1Q6P1K1 146 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PRR23CQ6ZRP0 262 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ZNF655Q8N720 491 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 TMEM38AQ9H6F2 299 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ACSS1Q9NUB1 689 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 FAM118AQ9NWS6 357 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 SOHLH2Q9NX45 425 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 OR5K3A6NET4 321 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 HMGN4O00479 90 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 BCKDKO14874 412 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PROM1O43490 865 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 HPRP00739 348 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 HMGN2P05204 90 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 BCKDHBP21953 392 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 MAGEA2P43356 314 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 GSTM5P46439 218 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 XKP51811 444 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ITGA1P56199 1179 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 C21orf59P57076 290 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 SHC2P98077 582 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 TSSK4Q6SA08 328 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 GKN2Q86XP6 184 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ARMC8Q8IUR7 673 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 AVL9Q8NBF6 648 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 MBOAT4Q96T53 435 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 AMBRA1Q9C0C7 1298 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 FAIMQ9NVQ4 179 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 P2RX2Q9UBL9 471 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 ENTPD2Q9Y5L3 495 aa9.37□□□□□ -0.91
VTA1-205ENST00000620996 GPC6Q9Y625 555 aaPredicted RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 MDC1Q14676 2089 aaKnown RBP9.37□□□□□ -0.91
VTA1-205ENST00000620996 SLC9B1P1A6NJY1 282 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 SGK494L7N484 410 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 LDB3O75112 727 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 UBXN7O94888 489 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 IFNW1P05000 195 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 PABPC4LP0CB38 370 aaKnown RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 ALOX12P18054 663 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 ENTPD1P49961 510 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 KHKP50053 298 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 ADARB1P78563 741 aaKnown RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 PRR5P85299 388 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 MEP1AQ16819 746 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 DUSP7Q16829 419 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 FGD3Q5JSP0 725 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 SNAP47Q5SQN1 464 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 DCP2Q8IU60 420 aaKnown RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 SHISA5Q8N114 240 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 ARL14Q8N4G2 192 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 METTL27Q8N6F8 245 aaPredicted RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 METTL25Q8N6Q8 603 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 BAHD1Q8TBE0 780 aaPredicted RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 GEMIN6Q8WXD5 167 aaKnown RBP9.36□□□□□ -0.91
VTA1-205ENST00000620996 SLC9A6Q92581 669 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 TGM7Q96PF1 710 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 CCDC90BQ9GZT6 254 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 CTPS2Q9NRF8 586 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 EHD3Q9NZN3 535 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 AASSQ9UDR5 926 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 NAALAD2Q9Y3Q0 740 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 SPACA6W5XKT8 324 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 ABCA7Q8IZY2 2146 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 VCANP13611 3396 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 LOC100130705A0A1B0GUX0 176 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 TFAP2AP05549 437 aa9.36□□□□□ -0.91
VTA1-205ENST00000620996 HOXB6P17509 224 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms