RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 NOL4LQ96MY1 436 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 PWWP2AQ96N64 755 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 LENG8Q96PV6 779 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 SIGLEC11Q96RL6 698 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MESP1Q9BRJ9 268 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PCGF1Q9BSM1 259 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 NDUFAF3Q9BU61 184 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TRMOQ9BU70 441 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TEX12Q9BXU0 123 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 FTHL17Q9BXU8 183 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 BEX2Q9BXY8 128 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ITPAQ9BY32 194 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PRRG3Q9BZD7 231 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PUS7LQ9H0K6 701 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 THAP2Q9H0W7 228 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 C11orf54Q9H0W9 315 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 EVA1AQ9H8M9 152 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CNTD2Q9H8S5 307 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 BCO1Q9HAY6 547 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CACYBPQ9HB71 228 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 PDE7BQ9NP56 450 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ACP6Q9NPH0 428 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TLR8Q9NR97 1041 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 RBFOX1Q9NWB1 397 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 ERVK13-1Q9NX77 482 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 AASSQ9UDR5 926 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MARCOQ9UEW3 520 aaPredicted RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 CLEC2DQ9UHP7 191 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 POMT2Q9UKY4 750 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 TBX20Q9UMR3 447 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 CARHSP1Q9Y2V2 147 aaKnown RBP3.34□□□□□ -1.87
SMC5-204ENST00000618375 ZNF281Q9Y2X9 895 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 MMACHCQ9Y4U1 282 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 ASB1Q9Y576 335 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PCDHGA6Q9Y5G7 932 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PCDHGA5Q9Y5G8 931 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PCDHGA1Q9Y5H4 931 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PCDHA8Q9Y5H6 950 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 NPTNQ9Y639 398 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 PTPRJQ12913 1337 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 DENND4AQ7Z401 1863 aa3.34□□□□□ -1.87
SMC5-204ENST00000618375 AKAP11Q9UKA4 1901 aa3.34□□□□□ -1.88
SMC5-204ENST00000618375 SLIT2O94813 1529 aa3.34□□□□□ -1.88
SMC5-204ENST00000618375 DDX60LQ5H9U9 1706 aaKnown RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 A0A087X0M5 115 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CCDC195A0A1B0GUA6 201 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 A0A1B0GX30 115 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 TMEM218A2RU14 115 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 XKRY2A2RUG3 117 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 OR2AT4A6NND4 320 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 C5orf58C9J3I9 102 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CYR61O00622 381 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 DVL2O14641 736 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ADAM10O14672 748 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 IMPA2O14732 288 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 PRMT5O14744 637 aaPredicted RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 TPP1O14773 563 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ANKRD28O15084 1053 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 NKRFO15226 690 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMC5-204ENST00000618375 SIGLEC5O15389 551 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 SLC16A6O15403 523 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 MSH4O15457 936 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 FABP7O15540 132 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 PPIHO43447 177 aaKnown RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 TMEM127O75204 238 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 TULP3O75386 442 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ITGA10O75578 1167 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 RFPL1O75677 317 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 RPP40O75818 363 aaKnown RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 ZMPSTE24O75844 475 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 AQP8O94778 261 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 SCAF4O95104 1147 aaKnown RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 ZNF205O95201 554 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CXCL14O95715 111 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 EFEMP2O95967 443 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 LGI1O95970 557 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 MOCS2O96007 188 aaPredicted RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 AK1P00568 194 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 F2P00734 622 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 F10P00742 488 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 IFNA17P01571 189 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 APOC3P02656 99 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CRYBA1P05813 215 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ITGAVP06756 1048 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CSF3P09919 207 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 KITP10721 976 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ODC1P11926 461 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 CYP4B1P13584 511 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 TYRP14679 529 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 IL7RP16871 459 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 PAMP19021 973 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 EFNA1P20827 205 aaPredicted RBP3.33□□□□□ -1.88
SMC5-204ENST00000618375 MAGP20916 626 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 ATP6V1B2P21281 511 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 PRKCHP24723 683 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 STOMP27105 288 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 PSMB9P28065 219 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 TEAD1P28347 426 aa3.33□□□□□ -1.88
SMC5-204ENST00000618375 OR1E1P30953 314 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms