RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 FRS3O43559 492 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 PRICKLE3O43900 615 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 MFN2O95140 757 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ZNF888P0CJ79 500 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 ITGA2P17301 1181 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 HOXD12P35452 270 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 TGFBR1P36897 503 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 BUD31P41223 144 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 MC3RP41968 323 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 XCR1P46094 333 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 RNF144AP50876 292 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 SLC35A2P78381 396 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 IL18R1Q13478 541 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 NFATC4Q14934 902 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 SPCS2Q15005 226 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 SYT16Q17RD7 645 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 THOC7Q6I9Y2 204 aaKnown RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 Q6ZSR6 202 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 OR2L5Q8NG80 312 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ROGDIQ9GZN7 287 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 C11orf16Q9NQ32 467 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 SEMA3GQ9NS98 782 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 IMPAD1Q9NX62 359 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ENTPD4Q9Y227 616 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 SEC16AO15027 2179 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 WDR87Q6ZQQ6 2873 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ABCA7Q8IZY2 2146 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 OR10H3O60404 316 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 CCNB2O95067 398 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 GABRG2P18507 467 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 HNRNPA2B1P22626 353 aaKnown RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 CTSKP43235 329 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 PPM1FP49593 454 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 AQP6Q13520 282 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 OR13H1Q8NG92 308 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ZNF420Q8TAQ5 688 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 PPP1R14BQ96C90 147 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ZG16BQ96DA0 208 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 HRASLS5Q96KN8 279 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 NMNAT1Q9HAN9 279 aaPredicted RBP11.72□□□□□ -0.53
CIITA-212ENST00000618207 TMEM74BQ9NUR3 256 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 ASB4Q9Y574 426 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 SLCO1B1Q9Y6L6 691 aa11.72□□□□□ -0.53
CIITA-212ENST00000618207 A0A0C4DFX4 3053 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 RGS10O43665 173 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 BCL10O95999 233 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 GABARAPL2P60520 117 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 GPR18Q14330 331 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 ALG11Q2TAA5 492 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
CIITA-212ENST00000618207 TTLQ8NG68 377 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 OR4C15Q8NGM1 316 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 MUL1Q969V5 352 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 HSPBAP1Q96EW2 488 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 IL4I1Q96RQ9 567 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 TUBA1CQ9BQE3 449 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 NT5DC2Q9H857 520 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 C2orf42Q9NWW7 574 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 RHBDL2Q9NX52 303 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 GPR83Q9NYM4 423 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 DUSP12Q9UNI6 340 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 AP1M2Q9Y6Q5 423 aa11.71□□□□□ -0.53
CIITA-212ENST00000618207 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 H3BN98 237 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 CTSVO60911 334 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 JUNBP17275 347 aaPredicted RBP11.71□□□□□ -0.54
CIITA-212ENST00000618207 TEAD1P28347 426 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 SRP54P61011 504 aaKnown RBP11.71□□□□□ -0.54
CIITA-212ENST00000618207 VBP1P61758 197 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 SIM1P81133 766 aaPredicted RBP11.71□□□□□ -0.54
CIITA-212ENST00000618207 SEC23BQ15437 767 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 TCTN3Q6NUS6 607 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 VN1R4Q7Z5H5 301 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 SLC44A3Q8N4M1 653 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 SUN3Q8TAQ9 357 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 TANKQ92844 425 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 RPL3LQ92901 407 aaKnown RBP11.71□□□□□ -0.54
CIITA-212ENST00000618207 COPS4Q9BT78 406 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 KIR3DX1Q9H7L2 352 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 CAPN10Q9HC96 672 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 STARD5Q9NSY2 213 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 TAS2R16Q9NYV7 291 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 HCN4Q9Y3Q4 1203 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 PCDHGA2Q9Y5H1 932 aa11.71□□□□□ -0.54
CIITA-212ENST00000618207 LOC105369274A0A096LPK9 316 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 LOC102723532A0A0G2JNH3 316 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 J3QRK9 145 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 P2RX6O15547 441 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
CIITA-212ENST00000618207 DNAJB5O75953 348 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 NTN1O95631 604 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 ANXA8P13928 327 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 TYRP1P17643 537 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 RHCEP18577 417 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 SERPINB1P30740 379 aa11.7□□□□□ -0.54
CIITA-212ENST00000618207 PXNP49023 591 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms