RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 BOP1Q14137 746 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 ZRANB3Q5FWF4 1079 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 ZNF687Q8N1G0 1237 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 PROKR2Q8NFJ6 384 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 OR2A12Q8NGT7 310 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 KLHL6Q8WZ60 621 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 TSSK3Q96PN8 268 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 SOSTQ9BQB4 213 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 CHST8Q9H2A9 424 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 SPNS1Q9H2V7 528 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 FKBPLQ9UIM3 349 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 PCDHB11Q9Y5F2 797 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 CSO75390 466 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 DDX5P17844 614 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 BTG1P62324 171 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 POU6F2P78424 691 aaPredicted RBP20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 POM121L1PQ3SYA9 428 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 TMEM201Q5SNT2 666 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 PTCHD4Q6ZW05 846 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 CACUL1Q86Y37 369 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 GPALPP1Q8IXQ4 340 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 FAM46DQ8NEK8 389 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 FCRL1Q96LA6 429 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 QRFPRQ96P65 431 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 NIPSNAP1Q9BPW8 284 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 ZDHHC6Q9H6R6 413 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 TMEM184CQ9NVA4 438 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 FTSJ1Q9UET6 329 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 MRPS17Q9Y2R5 130 aaKnown RBP20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 ZNF451Q9Y4E5 1061 aa20.82■□□□□ 0.92
POLR2J3-220ENST00000613744 CDRT1O95170 752 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 ARSBP15848 533 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 RPS3P23396 243 aaKnown RBP eCLIP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 SDC2P34741 201 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 C21orf58P58505 322 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 FZD5Q13467 585 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 C1DQ13901 141 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 PTGES3Q15185 160 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 SF3A2Q15428 464 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 WSCD2Q2TBF2 565 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 HNRNPA1L2Q32P51 320 aaKnown RBP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 IFI44LQ53G44 452 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 CDKL4Q5MAI5 379 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 NDUFAF5Q5TEU4 345 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 PXDC1Q5TGL8 231 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 KIAA1211LQ6NV74 962 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 TEX261Q6UWH6 196 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 OR8J2Q8NGG1 315 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 SH3KBP1Q96B97 665 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 PIGUQ9H490 435 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 NT5DC2Q9H857 520 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 FOLH1BQ9HBA9 442 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 MCUBQ9NWR8 336 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 ING4Q9UNL4 249 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 U3KQ87 197 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 BDP1A6H8Y1 2624 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 FAM240BA0A1B0GVZ2 78 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 SCN2BO60939 215 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 DGKAP23743 735 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 NTSR1P30989 418 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 RECQLP46063 649 aaPredicted RBP20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 CRYBA2P53672 197 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 AP1S1P61966 158 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 SPIBQ01892 262 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 C9orf64Q5T6V5 341 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 BICRALQ6AI39 1079 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 CERS6Q6ZMG9 384 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 ZNF621Q6ZSS3 439 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 FAM92BQ6ZTR7 304 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 NANOGP1Q8N7R0 232 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 EDAQ92838 391 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 RLIMQ9NVW2 624 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 NCOR1O75376 2440 aa20.81■□□□□ 0.92
POLR2J3-220ENST00000613744 CXorf51AA0A1B0GTR3 108 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 TMEM229AB2RXF0 380 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 LYRM1O43325 122 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 GUCA1CO95843 209 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 PDYNP01213 254 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 DCNP07585 359 aaKnown RBP20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SLC2A2P11168 524 aaPredicted RBP20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SOX3P41225 446 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 HMGA2P52926 109 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 BCL2L1Q07817 233 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 EXOC3L2Q2M3D2 409 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 COL28A1Q2UY09 1125 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SPPL2AQ8TCT8 520 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SELENOMQ8WWX9 145 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 CREB3L1Q96BA8 519 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 TRMT61AQ96FX7 289 aaKnown RBP20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 CCDC120Q96HB5 630 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SMIM14Q96QK8 99 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 RANBP3Q9H6Z4 567 aaPredicted RBP20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 C2orf42Q9NWW7 574 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 PCDHB9Q9Y5E1 797 aa20.8■□□□□ 0.92
POLR2J3-220ENST00000613744 SGK494L7N484 410 aa20.79■□□□□ 0.92
POLR2J3-220ENST00000613744 TACR1P25103 407 aa20.79■□□□□ 0.92
POLR2J3-220ENST00000613744 WNT3P56703 355 aa20.79■□□□□ 0.92
POLR2J3-220ENST00000613744 CACNG1Q06432 222 aa20.79■□□□□ 0.92
POLR2J3-220ENST00000613744 SIGLEC14Q08ET2 396 aa20.79■□□□□ 0.92
POLR2J3-220ENST00000613744 HNRNPA0Q13151 305 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms