RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 TPRG1LQ5T0D9 272 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 Q6ZSR6 202 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 VN1R4Q7Z5H5 301 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SLC44A2Q8IWA5 706 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 CAMKVQ8NCB2 501 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 GPR32P1Q8NGA4 272 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 FLVCR1-AS1Q8TAF5 88 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SUN3Q8TAQ9 357 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 XAGE5Q8WWM1 108 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 FAM3CQ92520 227 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SGCDQ92629 289 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 CNRIP1Q96F85 164 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 COL21A1Q96P44 957 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 OR2A14Q96R47 310 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SERHL2Q9H4I8 314 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 NTMQ9P121 344 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 ERVK-18Q9QC07 812 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 FBXW2Q9UKT8 454 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 RNF6Q9Y252 685 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 SNX11Q9Y5W9 270 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
USP6NL-206ENST00000609853 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-206ENST00000609853 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.6
USP6NL-206ENST00000609853 SH3D21A4FU49 640 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 DUXAA6NLW8 204 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 C2CD4DB7Z1M9 353 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 J3KTA2 159 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 PCDH17O14917 1159 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 AGR2O95994 175 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 VIPP01282 170 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 H1F0P07305 194 aaKnown RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 SMIM10L1P0DMW3 83 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 UGT2B7P16662 529 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 TLX1P31314 330 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 KRT20P35900 424 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 RAB8AP61006 207 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 BTN3A2P78410 334 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 DCST1Q5T197 706 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 TCTN3Q6NUS6 607 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 FBXO42Q6P3S6 717 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ABHD13Q7L211 337 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 SZRD1Q7Z422 152 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 RBM12BQ8IXT5 1001 aaKnown RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 CCDC116Q8IYX3 515 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 GJD3Q8N144 294 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF655Q8N720 491 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 FAM81AQ8TBF8 368 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 UTP15Q8TED0 518 aaKnown RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 APH1BQ8WW43 257 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 UCN3Q969E3 161 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 FKBP10Q96AY3 582 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 SMIM10Q96HG1 83 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ZNF681Q96N22 645 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 OR2A5Q96R48 311 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 SIGLEC11Q96RL6 698 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 NIPSNAP1Q9BPW8 284 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 FUNDC2Q9BWH2 189 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 TRIM45Q9H8W5 580 aaPredicted RBP11.27□□□□□ -0.61
USP6NL-206ENST00000609853 IMPAD1Q9NX62 359 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ACTR10Q9NZ32 417 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 PSORS1C1Q9UIG5 152 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 ENPP5Q9UJA9 477 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 CA5BQ9Y2D0 317 aa11.27□□□□□ -0.61
USP6NL-206ENST00000609853 A0A1W2PRQ8 180 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 GLOD5A6NK44 160 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 C2orf74A8MZ97 194 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 SYT5O00445 386 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 FFAR1O14842 300 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 SCAMP1O15126 338 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 ZSCAN9O15535 394 aaPredicted RBP11.26□□□□□ -0.61
USP6NL-206ENST00000609853 BCL10O95999 233 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 HMGN2P05204 90 aaKnown RBP11.26□□□□□ -0.61
USP6NL-206ENST00000609853 CD72P21854 359 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 GP2P55259 537 aaKnown RBP11.26□□□□□ -0.61
USP6NL-206ENST00000609853 LIM2P55344 173 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 TNFRSF17Q02223 184 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 DGCR6Q14129 220 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 GPR18Q14330 331 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 SYPL1Q16563 259 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 CYP27C1Q4G0S4 372 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 ATAD3BQ5T9A4 648 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 C18orf63Q68DL7 685 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 KIAA0895LQ68EN5 471 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 FIGLAQ6QHK4 219 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 LINC00299Q6ZSB3 139 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 AQP11Q8NBQ7 271 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 CCL4L1Q8NHW4 92 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 GAB3Q8WWW8 586 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 ELP4Q96EB1 424 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 TRNT1Q96Q11 434 aaKnown RBP11.26□□□□□ -0.61
USP6NL-206ENST00000609853 MACROD1Q9BQ69 325 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
USP6NL-206ENST00000609853 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms