RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SEMA3GQ9NS98 782 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF318Q5VUA4 2279 aa16.05■□□□□ 0.16
SHKBP1-216ENST00000598201 A0A087WXM4 84 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 TNFRSF11BO00300 401 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 VILLO15195 856 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SLC28A2O43868 658 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 NME6O75414 186 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 HMGN2P05204 90 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ITGAMP11215 1152 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 NME1P15531 152 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CPN2P22792 545 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 EPHA2P29317 976 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 MPIP34949 423 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 MC3RP41968 323 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 XCR1P46094 333 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ISL1P61371 349 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CD47Q08722 323 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SIM2Q14190 667 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 LASP1Q14847 261 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 MEP1AQ16819 746 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF691Q5VV52 312 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 LAIR2Q6ISS4 152 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 OOSP2Q86WS3 158 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ATG16L2Q8NAA4 619 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 OR4C15Q8NGM1 316 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 OR52J3Q8NH60 311 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SFXN5Q8TD22 340 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ITFG2Q969R8 447 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 RERGQ96A58 199 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 C16orf58Q96GQ5 468 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF347Q96SE7 839 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 TREX2Q9BQ50 279 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 MIR1-1HGQ9H1L0 117 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 FAM60AQ9NP50 221 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ABCA7Q8IZY2 2146 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 TLR4O00206 839 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ADAMDEC1O15204 470 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 JRKO75564 520 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CTSBP07858 339 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ST6GAL1P15907 406 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 RXRGP48443 463 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CLK3P49761 638 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CDH12P55289 794 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SIM1P81133 766 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SPIBQ01892 262 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 RPL6Q02878 288 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 FUT5Q11128 374 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 RAPSNQ13702 412 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CHDHQ8NE62 594 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 CADM4Q8NFZ8 388 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 LMX1AQ8TE12 382 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 KAT2AQ92830 837 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 SPACA7Q96KW9 195 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 FAM210AQ96ND0 272 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 YTHDF1Q9BYJ9 559 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ROGDIQ9GZN7 287 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 STARD5Q9NSY2 213 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 GIMAP4Q9NUV9 329 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 TUBA8Q9NY65 449 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 NDUFA13Q9P0J0 144 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 P2RX2Q9UBL9 471 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 POMT2Q9UKY4 750 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 DAPP1Q9UN19 280 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 KCNE3Q9Y6H6 103 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF780BQ9Y6R6 833 aa16.04■□□□□ 0.16
SHKBP1-216ENST00000598201 URADA6NGE7 173 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 BCKDKO14874 412 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 B3GALT2O43825 422 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 FESP07332 822 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ALOX12P18054 663 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 BUD31P41223 144 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 TPD52P55327 224 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 RACK1P63244 317 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ABHD13Q7L211 337 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 OR4N5Q8IXE1 308 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 RBM12BQ8IXT5 1001 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ELP4Q96EB1 424 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 WFDC6Q9BQY6 131 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 KRT84Q9NSB2 600 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 KIF17Q9P2E2 1029 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ENPP4Q9Y6X5 453 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 DNAJB5O75953 348 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 FHP07954 510 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 NR2F1P10589 423 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ETS2P15036 469 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ITGA2P17301 1181 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 AGXTP21549 392 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 KHKP50053 298 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 VSX2P58304 361 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ELOCQ15369 112 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 EXOC3L2Q2M3D2 409 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 DEFB110Q30KQ9 67 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ZNF605Q86T29 641 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 ARL14Q8N4G2 192 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 SGCDQ92629 289 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 DGCR14Q96DF8 476 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 HSPA12BQ96MM6 686 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 COL21A1Q96P44 957 aa16.03■□□□□ 0.16
SHKBP1-216ENST00000598201 PIP5K1AQ99755 562 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms