RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TANC1Q9C0D5 1861 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 FAM183AA6NL82 134 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ACOX3O15254 700 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 SCELO95171 688 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 TRIM23P36406 574 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 MAN2A2P49641 1150 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 C21orf59P57076 290 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 RPS7P62081 194 aaKnown RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 ZNF155Q12901 538 aaPredicted RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 MED22Q15528 200 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 BCL7AQ4VC05 210 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ASPGQ86U10 573 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 CARM1Q86X55 608 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 ZBED6CLQ96FA7 236 aaPredicted RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 FOXN4Q96NZ1 517 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 MMP17Q9ULZ9 603 aa9.71□□□□□ -0.86
RFFL-212ENST00000584655 SAMD4AQ9UPU9 718 aaKnown RBP9.71□□□□□ -0.86
RFFL-212ENST00000584655 LRRN3E7EW58 273 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 SCN2BO60939 215 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 ATP5A1P25705 553 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 DAPP51397 102 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 SLC36A3Q495N2 470 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 IGFN1Q86VF2 1251 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 METTL4Q8N3J2 472 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 NUP43Q8NFH3 380 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 OR8J3Q8NGG0 315 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 UBTD2Q8WUN7 234 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RPL3LQ92901 407 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 DEPDC7Q96QD5 511 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 LMF1Q96S06 567 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 LRRN3Q9H3W5 708 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 TBC1D17Q9HA65 648 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 FAM120CQ9NX05 1096 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 GPR37L1O60883 481 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 IGHV4-34P06331 123 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 CD6P30203 668 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 GABRA3P34903 492 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 BSGP35613 385 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 SLC9A3P48764 834 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RAD23AP54725 363 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RPP38P78345 283 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 CSTF1Q05048 431 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 ATP6AP1Q15904 470 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 CTU2Q2VPK5 515 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 TCEAL6Q6IPX3 200 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 FBXO42Q6P3S6 717 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RIMKLAQ8IXN7 391 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 TCEAL3Q969E4 200 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 MS4A6EQ96DS6 147 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 NR1H4Q96RI1 486 aaPredicted RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 TREX2Q9BQ50 279 aaPredicted RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 CXorf21Q9HAI6 301 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 FAM118AQ9NWS6 357 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 USP36Q9P275 1121 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 TMCC3Q9ULS5 477 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 COL6A6A6NMZ7 2263 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 DSPP15924 2871 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 FAM171A2A8MVW0 826 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 CCNDBP1O95273 360 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 IFNW1P05000 195 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 LCKP06239 509 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 NR2F6P10588 404 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 TAS2R41P59536 307 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RUNX2Q13950 521 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 KLHL12Q53G59 568 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 BBS10Q8TAM1 723 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 ZFPM2Q8WW38 1151 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RBM18Q96H35 190 aaKnown RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 FAIM2Q9BWQ8 316 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 PHF7Q9BWX1 381 aaPredicted RBP9.7□□□□□ -0.86
RFFL-212ENST00000584655 FAM192AQ9GZU8 254 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 RNF167Q9H6Y7 350 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 LHX9Q9NQ69 397 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 GPR83Q9NYM4 423 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 NEUROG3Q9Y4Z2 214 aa9.7□□□□□ -0.86
RFFL-212ENST00000584655 CSNK2A2P19784 350 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 RGS8P57771 180 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 SNTA1Q13424 505 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 VWA2Q5GFL6 755 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 KIAA1161Q6NSJ0 714 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 HSDL2Q6YN16 418 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DPP10Q8N608 796 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 TFAP2CQ92754 450 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 EFHD2Q96C19 240 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 FNDC11Q9BVV2 318 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 PNPLA3Q9NST1 481 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 ZNF282Q9UDV7 671 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 TSPAN11A1L157 253 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 PEX12O00623 359 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DLGAP1O14490 977 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 UMPSP11172 480 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 FCGR1AP12314 374 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DDCP20711 480 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 RPL5P46777 297 aaKnown RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 IFI44LQ53G44 452 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 PHF19Q5T6S3 580 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 FAM71E1Q6IPT2 247 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms