RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RSPH9Q9H1X1 276 aaPredicted RBP1.62□□□□□ -2.15
TOP2A-202ENST00000577541 MTIF3Q9H2K0 278 aaKnown RBP1.62□□□□□ -2.15
TOP2A-202ENST00000577541 IKZF5Q9H5V7 419 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 SRD5A3Q9H8P0 318 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 PSORS1C1Q9UIG5 152 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 CDH7Q9ULB5 785 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 LIPT1Q9Y234 373 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 TEX264Q9Y6I9 313 aa1.62□□□□□ -2.15
TOP2A-202ENST00000577541 IGKV6-21A0A0C4DH24 114 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 A0A0U1RQG5 324 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 A0A1W2PRV1 198 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 FAM149AA5PLN7 773 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 OOEPA6NGQ2 149 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SDR42E2A6NKP2 422 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SAP18O00422 153 aaKnown RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 TNFSF11O14788 317 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZNF263O14978 683 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 TTI1O43156 1089 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 LRRTM2O43300 516 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 B4GAT1O43505 415 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 IGHV3-9P01782 118 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 NUDT17P0C025 328 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZCCHC18P0CG32 403 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 VCLP18206 1134 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 GDF1P27539 372 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ATP5DP30049 168 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 PPP2R1BP30154 601 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SOAT1P35610 550 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 FRKP42685 505 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SMSP52788 366 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SLC12A3P55017 1021 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 KRTAP10-10P60014 251 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ASIC1P78348 528 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 AKAP17AQ02040 695 aaKnown RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SCN1BQ07699 218 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 AP1B1Q10567 949 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 RCN2Q14257 317 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SPHARQ15513 63 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 PKN2Q16513 984 aaKnown RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 PPP1R3AQ16821 1122 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 MICAQ29983 383 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 GSG1Q2KHT4 349 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 GLRA4Q5JXX5 417 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SNRNP48Q6IEG0 339 aaKnown RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 CASC4Q6P4E1 433 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZNF530Q6P9A1 599 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 C2orf66Q6UXQ4 117 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 MSANTD1Q6ZTZ1 278 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SERPINA12Q8IW75 414 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 CCDC83Q8IWF9 413 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 KLHDC8AQ8IYD2 350 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SMYD1Q8NB12 490 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 OR7G3Q8NG95 312 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZNF564Q8TBZ8 553 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 MGARPQ8TDB4 240 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ST7LQ8TDW4 575 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 UBE2Q2Q8WVN8 375 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 CRYGNQ8WXF5 182 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZNF274Q96GC6 653 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ZNF285Q96NJ3 590 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 PANX3Q96QZ0 392 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SPAG8Q99932 426 aaPredicted RBP1.61□□□□□ -2.15
TOP2A-202ENST00000577541 WWP1Q9H0M0 922 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 TUFT1Q9NNX1 390 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 DNAJC11Q9NVH1 559 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 PLEK2Q9NYT0 353 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 FETUBQ9UGM5 382 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 EXOC6BQ9Y2D4 811 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ATG4BQ9Y4P1 393 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 SNX5Q9Y5X3 404 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 ACEP12821 1306 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 MEGF6O75095 1541 aa1.61□□□□□ -2.15
TOP2A-202ENST00000577541 DHX29Q7Z478 1369 aaKnown RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 MAGEB16A2A368 324 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 B4DXG7 233 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 WDR46O15213 610 aaKnown RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 TSPAN2O60636 221 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 CSO75390 466 aaKnown RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 RAD51DO75771 328 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 CXCL14O95715 111 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 OLFM2O95897 454 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 GH1P01241 217 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 LYNP07948 512 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 CT45A8P0DMV1 189 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 CT45A9P0DMV2 189 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 UROSP10746 265 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 PGAM2P15259 253 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 GPX3P22352 226 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 MTIF2P46199 727 aaKnown RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 SERPINH1P50454 418 aaKnown RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 EFNA3P52797 238 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 WNT4P56705 351 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 RIPK4P57078 832 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 ST8SIA6P61647 398 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 MSLNQ13421 630 aaPredicted RBP1.6□□□□□ -2.15
TOP2A-202ENST00000577541 CRMP1Q14194 572 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 EMC2Q15006 297 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 KBTBD12Q3ZCT8 623 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 AARDQ4LEZ3 155 aa1.6□□□□□ -2.15
TOP2A-202ENST00000577541 PAN3Q58A45 887 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms