RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FUT7Q11130 342 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 SNTA1Q13424 505 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 BCL2A1Q16548 175 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 C6orf52Q5T4I8 152 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 SLC30A6Q6NXT4 461 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 PAQR3Q6TCH7 311 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 YRDCQ86U90 279 aaKnown RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 TRIM42Q8IWZ5 723 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 ST13P4Q8IZP2 240 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 LRRC57Q8N9N7 239 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 OR14L1PQ8NHC6 308 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 ANKRD9Q96BM1 317 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 ZNF669Q96BR6 464 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 ZC3HAV1LQ96H79 300 aaKnown RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 ZNF845Q96IR2 970 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 VPS39Q96JC1 886 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 CSF3RQ99062 836 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 METTL7AQ9H8H3 244 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 ACTR8Q9H981 624 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 PRM3Q9NNZ6 103 aa7.87□□□□□ -1.15
SMG1-216ENST00000569122 C20orf96Q9NUD7 363 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 TEX10Q9NXF1 929 aaPredicted RBP7.87□□□□□ -1.15
SMG1-216ENST00000569122 CUBNO60494 3623 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 UQCRHLA0A096LP55 91 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 MYOCOSA0A1B0GUC4 107 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 TCRBV7S2A1N4TA0A589 114 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 GRID2IPA4D2P6 1211 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 OVOL3O00110 214 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 PLOD2O00469 737 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 EMC8O43402 210 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 OR10H2O60403 315 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 PGRP06401 933 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 ZSCAN5DPP0CG00 497 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 MLNP12872 115 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 ALOX15P16050 662 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 NAGAP17050 411 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 SRD5A1P18405 259 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 CPN2P22792 545 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 LOXP28300 417 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 PTPN6P29350 595 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 GALNSP34059 522 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 FBXW4P57775 412 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 CDKL1Q00532 357 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 PDAP1Q13442 181 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 SNX1Q13596 522 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 SLBPQ14493 270 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG1-216ENST00000569122 EBPQ15125 230 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 CCNG2Q16589 344 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 HIST2H2ACQ16777 129 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 SPRED3Q2MJR0 410 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 AP5B1Q2VPB7 878 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 TMEM35AQ53FP2 167 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 PAGE2BQ5JRK9 111 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 DCST1Q5T197 706 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 FNDC7Q5VTL7 733 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 HIST2H2AA3Q6FI13 130 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 ADAM5Q6NVV9 412 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 CAVIN1Q6NZI2 390 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 TMEM81Q6P7N7 255 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 DRICH1Q6PGQ1 229 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 BHLHB9Q6PI77 547 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 ZNF474Q6S9Z5 364 aaPredicted RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 ZNF550Q7Z398 422 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 IFNEQ86WN2 208 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 BBOF1Q8ND07 529 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 C17orf47Q8NEP4 570 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 C1orf54Q8WWF1 131 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 RIT1Q92963 219 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 PDLIM5Q96HC4 596 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 SERPINB12Q96P63 405 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 NDNQ99608 321 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 AICDAQ9GZX7 198 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 SLCO5A1Q9H2Y9 848 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 EHD1Q9H4M9 534 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 RPF2Q9H7B2 306 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 PRDM7Q9NQW5 492 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 GPRC5BQ9NZH0 403 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 EXO1Q9UQ84 846 aaKnown RBP7.86□□□□□ -1.15
SMG1-216ENST00000569122 ZKSCAN5Q9Y2L8 839 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 SNX8Q9Y5X2 465 aa7.86□□□□□ -1.15
SMG1-216ENST00000569122 ZCWPW2A0A1B0GU75 182 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 CTAGE15A4D2H0 777 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 GNB5O14775 395 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 HCRTR2O43614 444 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 LRATO95237 230 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 HNF1AP20823 631 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 HIST1H1TP22492 207 aaPredicted RBP7.85□□□□□ -1.15
SMG1-216ENST00000569122 DEKP35659 375 aaKnown RBP7.85□□□□□ -1.15
SMG1-216ENST00000569122 ACVR1BP36896 505 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 BUD31P41223 144 aaPredicted RBP7.85□□□□□ -1.15
SMG1-216ENST00000569122 CASP9P55211 416 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 SLC37A1P57057 533 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 RPS13P62277 151 aaKnown RBP7.85□□□□□ -1.15
SMG1-216ENST00000569122 HERVK_113P63132 956 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 ERVK-8P63133 956 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 ID2Q02363 134 aa7.85□□□□□ -1.15
SMG1-216ENST00000569122 LAPTM5Q13571 262 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms