RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CCNYL2Q5T2Q4 361 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC25A24Q6NUK1 477 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 CASC4Q6P4E1 433 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 CD300LGQ6UXG3 332 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 NIPA1Q7RTP0 329 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 PIGWQ7Z7B1 504 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SIAH3Q8IW03 269 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 KDM8Q8N371 416 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPEM1Q8N4L4 309 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 STKLD1Q8NE28 680 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR2AJ1Q8NGZ0 328 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 EXD1Q8NHP7 514 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 FCAMRQ8WWV6 532 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 CRYGNQ8WXF5 182 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAD54LQ92698 747 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 FBXO17Q96EF6 278 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SCRN2Q96FV2 425 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 EPSTI1Q96J88 318 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 CEP170P1Q96L14 293 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SAMD8Q96LT4 415 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 C17orf77Q96MU5 243 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 KCNK16Q96T55 309 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 FEVQ99581 238 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLX1AQ9BQ83 275 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 GTPBP2Q9BX10 602 aaKnown RBP3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 FN3KQ9H479 309 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAD21L1Q9H4I0 556 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 TFB2MQ9H5Q4 396 aaKnown RBP3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 AKIRIN1Q9H9L7 192 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 UPF2Q9HAU5 1272 aaKnown RBP3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 RNPEPL1Q9HAU8 725 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 PALMDQ9NP74 551 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAB9BQ9NP90 201 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZDHHC4Q9NPG8 344 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 POLE3Q9NRF9 147 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 SOHLH2Q9NX45 425 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 BARHL2Q9NY43 387 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 VPS54Q9P1Q0 977 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 HPCAL4Q9UM19 191 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 KCNK6Q9Y257 313 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 TENM4Q6N022 2769 aa3.04□□□□□ -1.92
HMGB1P6-201ENST00000569046 TSC2P49815 1807 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SF3B1O75533 1304 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TEX13DA0A0J9YY54 714 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR2M5A3KFT3 312 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ANKRD66B4E2M5 251 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM72CH0Y354 149 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 H0YIG0 161 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM189-UBE2V1I3L0A0 370 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 HIP1O00291 1037 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 PLK4O00444 970 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NTN3O00634 580 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TO15178 435 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NDUFS4O43181 175 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 XRCC3O43542 346 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLC37A4O43826 429 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SSX4O60224 188 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 PDE9AO76083 593 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 B3GAT3O94766 335 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 AKR7A3O95154 331 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 PGLSO95336 258 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DIRAS3O95661 229 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 MT-ATP6P00846 226 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 LIPFP07098 398 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 PLA2G4BP0C869 781 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NCF1P14598 390 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RPS2P15880 293 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 BCKDHBP21953 392 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 EEF1B2P24534 225 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 MPZP25189 248 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CHRNA3P32297 505 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DHPSP49366 369 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SMSP52788 366 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CTSCP53634 463 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CDK3Q00526 305 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 FOLH1Q04609 750 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SPAG1Q07617 926 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 MRPL28Q13084 256 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 UBE2V1Q13404 147 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 GAMTQ14353 236 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 EMC2Q15006 297 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 KRTAP27-1Q3LI81 207 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TAF1BQ53T94 588 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TECRLQ5HYJ1 363 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 LRRC73Q5JTD7 316 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TCTE1Q5JU00 501 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CYP4A22Q5TCH4 519 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM72AQ5TYM5 149 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CES4AQ5XG92 561 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ALS2CLQ60I27 953 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ARHGAP17Q68EM7 881 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM72DQ6L9T8 149 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ADAM5Q6NVV9 412 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NEK5Q6P3R8 708 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NOTUMQ6P988 496 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CYB5D1Q6P9G0 228 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF534Q76KX8 674 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM110Q86TL2 294 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms