RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 AVL9Q8NBF6 648 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 BPIFB6Q8NFQ5 453 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 RSC1A1Q92681 617 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 TMEM19Q96HH6 336 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 FEVQ99581 238 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 PCED1AQ9H1Q7 454 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 ZCCHC3Q9NUD5 404 aaKnown RBP16.7■□□□□ 0.26
NEIL1-221ENST00000569035 PLEKHM1Q9Y4G2 1056 aa16.7■□□□□ 0.26
NEIL1-221ENST00000569035 A0A0G2JPF8 293 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 DUXAA6NLW8 204 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 HNRNPCL2B2RXH8 293 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 HNRNPCL3B7ZW38 293 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 HMGN4O00479 90 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 EMC8O43402 210 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 MITFO75030 526 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 OPN1SWP03999 348 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 IFI6P09912 130 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 HNRNPCL4P0DMR1 293 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 CCNA2P20248 432 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 MATN1P21941 496 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 TLX1P31314 330 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 KCNJ5P48544 419 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SLC35A2P78381 396 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SRSF5Q13243 272 aaKnown RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 GPR107Q5VW38 600 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 GTF2IRD2BQ6EKJ0 949 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 ZNF793Q6ZN11 406 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 LINC00299Q6ZSB3 139 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 PRSS48Q7RTY5 328 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 RD3Q7Z3Z2 195 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 GTF2IRD2Q86UP8 949 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 TRIM48Q8IWZ4 208 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SLC22A18ASQ8N1D0 253 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 DTWD2Q8NBA8 298 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 CAMKVQ8NCB2 501 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 RORBQ92753 470 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 TSACCQ96A04 125 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 MIR1-1HGQ9H1L0 117 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SEC14L3Q9UDX4 400 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 PNMA8BQ9ULN7 279 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 MGAT4BQ9UQ53 548 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SLC9A8Q9Y2E8 581 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SH3GLB1Q9Y371 365 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 GPC6Q9Y625 555 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 OR2A25A4D2G3 310 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 A6NCN8 305 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 ZNF99A8MXY4 864 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 H3BMQ9 156 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 RGS10O43665 173 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 ADAP00813 363 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 PEBP1P30086 187 aaKnown RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 TSEN54Q7Z6J9 526 aaKnown RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 OR4E2Q8NGC2 313 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SUN3Q8TAQ9 357 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 MYDGFQ969H8 173 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 COG8Q96MW5 612 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SERINC2Q96SA4 455 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 C11orf16Q9NQ32 467 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 ACER3Q9NUN7 267 aa16.69■□□□□ 0.26
NEIL1-221ENST00000569035 SCHIP1Q9P0W5 487 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-221ENST00000569035 PLXND1Q9Y4D7 1925 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 GSAPA4D1B5 854 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 FAAHO00519 579 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 PROM1O43490 865 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 SLC28A2O43868 658 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 RASGRP1O95267 797 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 THEGLP0DJG4 465 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 NR2F1P10589 423 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 CD247P20963 164 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 BLKP51451 505 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 CDC42P60953 191 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 NDUFA9Q16795 377 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 TNFAIP8L2Q6P589 184 aaPredicted RBP16.68■□□□□ 0.26
NEIL1-221ENST00000569035 ABHD13Q7L211 337 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 B3GNT8Q7Z7M8 397 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 WDR5BQ86VZ2 330 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 PLD3Q8IV08 490 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 MMP21Q8N119 569 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 FBXL6Q8N531 539 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 ZNF540Q8NDQ6 660 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 DHRS1Q96LJ7 313 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 BARD1Q99728 777 aaKnown RBP16.68■□□□□ 0.26
NEIL1-221ENST00000569035 SPHK1Q9NYA1 384 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 ZNF624Q9P2J8 865 aaPredicted RBP16.68■□□□□ 0.26
NEIL1-221ENST00000569035 SPACA6W5XKT8 324 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 VPS13AQ96RL7 3174 aa16.68■□□□□ 0.26
NEIL1-221ENST00000569035 PRAMEF33A0A0G2JMD5 474 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 SH3D21A4FU49 640 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 C2orf74A8MZ97 194 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 ZSCAN9O15535 394 aaPredicted RBP16.67■□□□□ 0.26
NEIL1-221ENST00000569035 PRAMEF10O60809 474 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 FAM20BO75063 409 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 SOX30O94993 753 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 VIPP01282 170 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 IFNA8P32881 189 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 POLR2IP36954 125 aaKnown RBP16.67■□□□□ 0.26
NEIL1-221ENST00000569035 TCEA2Q15560 299 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 EXOC3L2Q2M3D2 409 aa16.67■□□□□ 0.26
NEIL1-221ENST00000569035 ANKRD13BQ86YJ7 626 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms