RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 NR2F6P10588 404 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ABATP80404 500 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF763Q0D2J5 394 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C19orf57Q0VDD7 668 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FGFBP1Q14512 234 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MZT2BQ6NZ67 158 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF730Q6ZMV8 503 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 COMTD1Q86VU5 262 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TCTE3Q8IZS6 198 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR4N4Q8N0Y3 316 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR5D16Q8NGK9 328 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR8J1Q8NGP2 316 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 POF1BQ8WVV4 589 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 XAGE5Q8WWM1 108 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C2orf49Q9BVC5 232 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LRFN2Q9ULH4 789 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SATB2Q9UPW6 733 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OR51B4Q9Y5P0 310 aa19.44■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FRS3O43559 492 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DPM1O60762 260 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IL1AP01583 271 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 H1F0P07305 194 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TRAPPC2P0DI81 140 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TRAPPC2BP0DI82 140 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 XPAP23025 273 aaPredicted RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ITGB7P26010 798 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ETV3P41162 512 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PRKAG1P54619 331 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CRB2Q5IJ48 1285 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LYPLAL1Q5VWZ2 237 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 KIAA1161Q6NSJ0 714 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PGBD2Q6P3X8 592 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CHST14Q8NCH0 376 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DBF4BQ8NFT6 615 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MSLNLQ96KJ4 702 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TBX5Q99593 518 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZSCAN5AQ9BUG6 496 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MTG2Q9H4K7 406 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ESCO2Q56NI9 601 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IDNKQ5T6J7 187 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLCZ1Q86YW0 608 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF366Q8N895 744 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C16orf78Q8WTQ4 265 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 UCN3Q969E3 161 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RNFT2Q96EX2 444 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 C11orf24Q96F05 449 aaPredicted RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DPCDQ9BVM2 203 aaPredicted RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CLCA2Q9UQC9 943 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MRPS7Q9Y2R9 242 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SYNDIG1LA6NDD5 238 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CKBP12277 381 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HLA-DMAP28067 261 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IMPA1P29218 277 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TPRG1Q6ZUI0 275 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 OXR1Q8N573 874 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 BMPERQ8N8U9 685 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ALG14Q96F25 216 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 QRSL1Q9H0R6 528 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ATP6V1HQ9UI12 483 aa19.43■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DOCK6Q96HP0 2047 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ANHXE9PGG2 379 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF821O75541 412 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IFNA14P01570 189 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 FURINP09958 794 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PTX3P26022 381 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ATP6V1E1P36543 226 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 EEF1A2Q05639 463 aaKnown RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 LMAN2Q12907 356 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF628Q5EBL2 1059 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 REEP3Q6NUK4 255 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PODNL1Q6PEZ8 512 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF431Q8TF32 576 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ASZ1Q8WWH4 475 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TMEM159Q96B96 161 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 NACC2Q96BF6 587 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MAGEB10Q96LZ2 347 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF224Q9NZL3 707 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SEC14L3Q9UDX4 400 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLAGL1Q9UM63 463 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 PLXND1Q9Y4D7 1925 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CDK2AP1O14519 115 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 TSPAN4O14817 238 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RAB36O95755 333 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 IGSF6O95976 241 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 UBL4AP11441 157 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HMGA1P17096 107 aaKnown RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 HMGA2P52926 109 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 CNTN1Q12860 1018 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ILKQ13418 452 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 GDPGP1Q6ZNW5 385 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ZNF582Q96NG8 517 aaPredicted RBP19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.42■□□□□ 0.77e-17■■■■■ 27.9
MAP1LC3B-206ENST00000564844 TRPC4Q9UBN4 977 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SLC9A8Q9Y2E8 581 aa19.42■□□□□ 0.7
MAP1LC3B-206ENST00000564844 RANBP2P49792 3224 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 A0A0A6YYJ9 748 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 ATF4P18848 351 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 DGKGP49619 791 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 SYPL1Q16563 259 aa19.41■□□□□ 0.7
MAP1LC3B-206ENST00000564844 MED27Q6P2C8 311 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms