RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PTHP01270 115 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 GASTP01350 101 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 BCHEP06276 602 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 YES1P07947 543 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 FHP07954 510 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ACP2P11117 423 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ERGP11308 486 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CPEP16870 476 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ELAVL4P26378 380 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ACADLP28330 430 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CA5AP35218 305 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 HOXD12P35452 270 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 AHRP35869 848 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TALDO1P37837 337 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SLC19A1P41440 591 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 STAT5AP42229 794 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PREPP48147 710 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CTSCP53634 463 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MLLT10P55197 1068 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TAS2R43P59537 309 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ASAH1Q13510 395 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 LAPTM4AQ15012 233 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TRAM2Q15035 370 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PDGFRLQ15198 375 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 QPRTQ15274 297 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SEC23BQ15437 767 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 HNRNPA1L2Q32P51 320 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TRIM60Q495X7 471 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PLK5Q496M5 336 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ZFP69Q49AA0 526 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MINDY4Q4G0A6 757 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 HSD17B12Q53GQ0 312 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ENTPD8Q5MY95 495 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 LCN1P1Q5VSP4 162 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PRAMEF9Q5VWM5 478 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TRIQKQ629K1 86 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SLC27A4Q6P1M0 643 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PAMR1Q6UXH9 720 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 DEF8Q6ZN54 512 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ARMCX6Q7L4S7 300 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 FAM129CQ86XR2 697 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MMAAQ8IVH4 418 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 GID4Q8IVV7 300 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PEX5LQ8IYB4 626 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 LRRC56Q8IYG6 542 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CDK20Q8IZL9 346 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SIMC1Q8NDZ2 872 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PIGXQ8TBF5 258 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ENKURQ8TC29 256 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SMG7Q92540 1137 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SGCDQ92629 289 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 HTRA1Q92743 480 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MAL2Q969L2 176 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SLC22A18Q96BI1 424 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TMEM19Q96HH6 336 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CAPNS2Q96L46 248 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 BARD1Q99728 777 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 CNPPD1Q9BV87 410 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TAPBPLQ9BX59 468 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TSSK6Q9BXA6 273 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MTIF3Q9H2K0 278 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 OR51B5Q9H339 312 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 DDX31Q9H8H2 851 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 FBRSQ9HAH7 460 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 FGF20Q9NP95 211 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 RPRD1BQ9NQG5 326 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PAK6Q9NQU5 681 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 INPP5EQ9NRR6 644 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PHPT1Q9NRX4 125 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 DDX28Q9NUL7 540 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 TMEM184CQ9NVA4 438 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 MRPL39Q9NYK5 338 aaKnown RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 POLHQ9Y253 713 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ZNF780BQ9Y6R6 833 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 SPACA6W5XKT8 324 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 PLXNA4Q9HCM2 1894 aa7.24□□□□□ -1.25
ATXN3-249ENST00000564606 ANKRD12Q6UB98 2062 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 FABP12A6NFH5 140 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 HMX3A6NHT5 357 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 ERVH48-1M5A8F1 160 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 PCDH17O14917 1159 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 CCL16O15467 120 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 EMC8O43402 210 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 TMCC2O75069 709 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 STX11O75558 287 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 ETHE1O95571 254 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 AK1P00568 194 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 OPN1SWP03999 348 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 ALPPP05187 535 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 RHOP08100 348 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 IFI6P09912 130 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 C6P13671 934 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 ADRB3P13945 408 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 CSNK2A2P19784 350 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-249ENST00000564606 PAICSP22234 425 aaKnown RBP7.23□□□□□ -1.25
ATXN3-249ENST00000564606 CMPK1P30085 196 aa7.23□□□□□ -1.25
ATXN3-249ENST00000564606 TLX1P31314 330 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-249ENST00000564606 FGF9P31371 208 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-249ENST00000564606 GABRA5P31644 462 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms