RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 GRAMD2AQ8IUY3 354 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TRIM42Q8IWZ5 723 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 ZNF610Q8N9Z0 462 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 OR10H5Q8NGA6 315 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 RAB3IL1Q8TBN0 382 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 DOK4Q8TEW6 326 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 PGM2Q96G03 612 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 PLPPR2Q96GM1 343 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TNFRSF13CQ96RJ3 184 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 LYRM4Q9HD34 91 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TEX10Q9NXF1 929 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 ARL15Q9NXU5 204 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 GDF2Q9UK05 429 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 IKZF3Q9UKT9 509 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 RNF112Q9ULX5 631 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 LIPT1Q9Y234 373 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 MAGED1Q9Y5V3 778 aaPredicted RBP6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 COMMD10Q9Y6G5 202 aa6.97□□□□□ -1.29
HERPUD1-206ENST00000563343 TCRBV7S3A2A0A539 114 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CTAGE9A4FU28 777 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 TP53I11O14683 189 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HAUS5O94927 633 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 IFNB1P01574 187 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HIST1H2AGP0C0S8 130 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CD8BP10966 210 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SRD5A1P18405 259 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HIST1H2ADP20671 130 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 TBXA2RP21731 343 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 IGFBP5P24593 272 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 MASP1P48740 699 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CASP9P55211 416 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 AP1S2P56377 157 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HERVK_113P63132 956 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 ERVK-8P63133 956 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 LOXL1Q08397 574 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SPRED3Q2MJR0 410 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 FAM174BQ3ZCQ3 159 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 PDLIM3Q53GG5 364 aaPredicted RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 TMEM81Q6P7N7 255 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 TRIM40Q6P9F5 258 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 PAQR3Q6TCH7 311 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SCIMPQ6UWF3 145 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 ENPP6Q6UWR7 440 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 IL17RELQ6ZVW7 336 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 UBE3DQ7Z6J8 389 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CAND1Q86VP6 1230 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 THOC6Q86W42 341 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 OR4N5Q8IXE1 308 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 GPATCH11Q8N954 259 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CNEP1R1Q8N9A8 125 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 BBOF1Q8ND07 529 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 PPWD1Q96BP3 646 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 LINGO1Q96FE5 620 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HIST1H2AHQ96KK5 128 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 HIST1H2AJQ99878 128 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 MAPKAP1Q9BPZ7 522 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 H2AFJQ9BTM1 129 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 ERVK-6Q9BXR3 956 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 REXO4Q9GZR2 422 aaKnown RBP6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SHARPINQ9H0F6 387 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 CCDC68Q9H2F9 335 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 PAK5Q9P286 719 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 ERVK-19Q9WJR5 959 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC22A14Q9Y267 594 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 DLGAP4Q9Y2H0 992 aa6.96□□□□□ -1.3
HERPUD1-206ENST00000563343 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 A0A088AWK7 358 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 GRID2IPA4D2P6 1211 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC35F4A4IF30 521 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ELOA3DA6NLF2 546 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 OR6C76A6NM76 312 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 B4DXG7 233 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 AP3B1O00203 1094 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 EMC8O43402 210 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 LMX1BO60663 402 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PRAMEF4O60810 478 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 CLEC3AO75596 197 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 CD8AP01732 235 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 RHOXF2BP0C7M4 288 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 C1GALT1C1LP0DN25 315 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 IGHV4-31P0DP07 118 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF16P17020 682 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF10P21506 573 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 RGS4P49798 205 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PGGT1BP53609 377 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 CLDN15P56746 228 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 RCN2Q14257 317 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PPP1R3AQ16821 1122 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PGGHGQ32M88 737 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ELOA3BQ3SY89 546 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 PRAMEF9Q5VWM5 478 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 OR2A2Q6IF42 318 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 CASC4Q6P4E1 433 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 ANGPTL8Q6UXH0 198 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 TMIGD1Q6UXZ0 262 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 DNAJC14Q6Y2X3 702 aaPredicted RBP6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 SLC29A4Q7RTT9 530 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 MYO1HQ8N1T3 1032 aa6.95□□□□□ -1.3
HERPUD1-206ENST00000563343 WDSUB1Q8N9V3 476 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms