RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ULK2Q8IYT8 1036 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 BBOF1Q8ND07 529 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 ELP5Q8TE02 316 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 DOK4Q8TEW6 326 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 CREB3L4Q8TEY5 395 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 NCLNQ969V3 563 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 MS4A6EQ96DS6 147 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 PDLIM5Q96HC4 596 aaKnown RBP6.82□□□□□ -1.32
SPG11-213ENST00000558988 GPR137Q96N19 417 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 F2RL3Q96RI0 385 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 RBBP8Q99708 897 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 CCDC77Q9BR77 488 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 DERL2Q9GZP9 239 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 REXO4Q9GZR2 422 aaKnown RBP6.82□□□□□ -1.32
SPG11-213ENST00000558988 ALG9Q9H6U8 611 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 CNOT10Q9H9A5 744 aaKnown RBP6.82□□□□□ -1.32
SPG11-213ENST00000558988 MOCS1Q9NZB8 636 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 ENTPD4Q9Y227 616 aa6.82□□□□□ -1.32
SPG11-213ENST00000558988 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
SPG11-213ENST00000558988 RELNP78509 3460 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 IGKV3D-11A0A0A0MRZ8 115 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 LRIT2A6NDA9 550 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 FAM166BA8MTA8 275 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 E7ESA3 106 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 UBXN8O00124 270 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 WWP2O00308 870 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CLDN4O14493 209 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TAPBPO15533 448 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ASNA1O43681 348 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 NME2P1O60361 137 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 STK16O75716 305 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TPOP07202 933 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 COX6B1P14854 86 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CD1DP15813 335 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TFEBP19484 476 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TNFRSF8P28908 595 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CASQ1P31415 396 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 GP5P40197 560 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ARL1P40616 181 aaPredicted RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 SLC6A12P48065 614 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 HLCSP50747 726 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 SMSP52788 366 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 RAB38P57729 211 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 MLF1P58340 268 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 PLGLB1Q02325 96 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 STX4Q12846 297 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CHIT1Q13231 466 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 DOC2AQ14183 400 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 FRG1Q14331 258 aaKnown RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 HIST2H2ACQ16777 129 aaPredicted RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 KBTBD12Q3ZCT8 623 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 HIST2H2AA3Q6FI13 130 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 SULT1C3Q6IMI6 304 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 MTFR2Q6P444 385 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TBC1D1Q86TI0 1168 aaPredicted RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 CYP4Z2PQ8N1L4 340 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 GHDCQ8N2G8 530 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TCAIMQ8N3R3 496 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ZNF808Q8N4W9 903 aaPredicted RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 NFAM1Q8NET5 270 aaPredicted RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 SPATA4Q8NEY3 305 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 B3GNT7Q8NFL0 401 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ADCY4Q8NFM4 1077 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 TTLQ8NG68 377 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 AGAP11Q8TF27 550 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 PTCD3Q96EY7 689 aaKnown RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 SCMH1Q96GD3 660 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CPNE1Q99829 537 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ERP44Q9BS26 406 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 SARGQ9BW04 601 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 OR8D2Q9GZM6 311 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 GRHL1Q9NZI5 618 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 KCMF1Q9P0J7 381 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 MRPS33Q9Y291 106 aaKnown RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 UTP11Q9Y3A2 253 aaKnown RBP6.81□□□□□ -1.32
SPG11-213ENST00000558988 ASB1Q9Y576 335 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 ANGPTL3Q9Y5C1 460 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 CREBBPQ92793 2442 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 PCNX1Q96RV3 2341 aa6.81□□□□□ -1.32
SPG11-213ENST00000558988 A0A1B0GTH9 108 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ESYT3A0FGR9 886 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ASPDHA6ND91 283 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 ENO4A6NNW6 628 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 A8MVJ9 347 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 PEX1O43933 1283 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 HS6ST1O60243 411 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 PRKNO60260 465 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 PRAMEF4O60810 478 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 LDB3O75112 727 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 OR2J2O76002 312 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SMIM10L1P0DMW3 83 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 CD22P20273 847 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SPRP35270 261 aaPredicted RBP6.8□□□□□ -1.32
SPG11-213ENST00000558988 SSR2P43308 183 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 GIPRP48546 466 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 SSR4P51571 173 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 RAP1GDS1P52306 607 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 MTTPP55157 894 aa6.8□□□□□ -1.32
SPG11-213ENST00000558988 LIM2P55344 173 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms