RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 EBPLQ9BY08 206 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 LRTM1Q9HBL6 345 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 C1orf109Q9NX04 203 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 STMN3Q9NZ72 180 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.96□□□□□ -0.49
XRCC3-206ENST00000554170 RAP2CQ9Y3L5 183 aa11.96□□□□□ -0.49
XRCC3-206ENST00000554170 TRBV11-1A0A0K0K1C0 115 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 HMGB1P1B2RPK0 211 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 TMEM233B4DJY2 109 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 LYPLA1O75608 230 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 ERAL1O75616 437 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 IL3P08700 152 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 SLC35E2P0CK97 266 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 GALNSP34059 522 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 XKP51811 444 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 WDR4P57081 412 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 RAE1P78406 368 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 ZNF763Q0D2J5 394 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 UGT3A2Q3SY77 523 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 ACER2Q5QJU3 275 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 H3F3CQ6NXT2 135 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 SLC48A1Q6P1K1 146 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 CDC26Q8NHZ8 85 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 PTPMT1Q8WUK0 201 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 PPWD1Q96BP3 646 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 OR8D2Q9GZM6 311 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 TUBB1Q9H4B7 451 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 CDCP1Q9H5V8 836 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 OLAHQ9NV23 265 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 COPS7AQ9UBW8 275 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 PPIEQ9UNP9 301 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 DLGAP4Q9Y2H0 992 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 WBP11Q9Y2W2 641 aaKnown RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 TMED5Q9Y3A6 229 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
XRCC3-206ENST00000554170 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-206ENST00000554170 WASHC1A8K0Z3 465 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 NPIPB8E9PQR5 432 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 ITM2AO43736 263 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SKAP2O75563 359 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 ZFAND5O76080 213 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 PORP16435 677 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 ARRB2P32121 409 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 C2orf80Q0P641 193 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 ART3Q13508 389 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 FCRLBQ6BAA4 426 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RPUSD3Q6P087 351 aaKnown RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 HSDL2Q6YN16 418 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 Q6ZSR9 355 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RPS19BP1Q86WX3 136 aaKnown RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 CRLF3Q8IUI8 442 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SAMD14Q8IZD0 417 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 LGI4Q8N135 537 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 KIF2BQ8N4N8 673 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 AMER2Q8N7J2 671 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 BCORP1Q8N888 145 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 APCDD1LQ8NCL9 501 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SUN3Q8TAQ9 357 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RAB3IL1Q8TBN0 382 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SLC2A12Q8TD20 617 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 HAS2Q92819 552 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RIT1Q92963 219 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 UCN3Q969E3 161 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 RELTQ969Z4 430 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 KLHL29Q96CT2 875 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 C11orf24Q96F05 449 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SH3GL2Q99962 352 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.94□□□□□ -0.58e-6■■■■□ 20.1
XRCC3-206ENST00000554170 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.94□□□□□ -0.5
XRCC3-206ENST00000554170 PLA2G3Q9NZ20 509 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 UTS2RQ9UKP6 389 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 CCL27Q9Y4X3 112 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 PTGDR2Q9Y5Y4 395 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 AKAP9Q99996 3911 aa11.94□□□□□ -0.5
XRCC3-206ENST00000554170 GTF3C1Q12789 2109 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 CDK2AP1O14519 115 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 FCHO1O14526 889 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 LSM1O15116 133 aaKnown RBP11.93□□□□□ -0.5
XRCC3-206ENST00000554170 WDPCPO95876 746 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 CPMP14384 443 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 CSNK2A2P19784 350 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-206ENST00000554170 NT5EP21589 574 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 MAPK1P28482 360 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 PTGER4P35408 488 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 GPR143P51810 404 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 RPL38P63173 70 aaKnown RBP11.93□□□□□ -0.5
XRCC3-206ENST00000554170 BST1Q10588 318 aa11.93□□□□□ -0.5
XRCC3-206ENST00000554170 ZNF267Q14586 743 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-206ENST00000554170 KIAA0040Q15053 153 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms