RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 C15orf41Q9Y2V0 281 aa12.99□□□□□ -0.33
CHMP1A-210ENST00000551981 KIAA1549Q9HCM3 1950 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 C2orf92A0A1B0GVN3 265 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 ACSL3O95573 720 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 GPR75O95800 540 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 HRGP04196 525 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 CPA2P48052 419 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 NRG3P56975 720 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 POU4F3Q15319 338 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 HLA-DQA1Q5Y7H0 255 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 P3H2Q8IVL5 708 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 SPATA6LQ8N4H0 392 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 PDPRQ8NCN5 879 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 RBM24Q9BX46 236 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 UGT2B28Q9BY64 529 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 CD244Q9BZW8 370 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 UBQLN3Q9H347 655 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 SNX15Q9NRS6 342 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 MOCS1Q9NZB8 636 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 PTBP2Q9UKA9 531 aaKnown RBP12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 TLN2Q9Y4G6 2542 aa12.98□□□□□ -0.33
CHMP1A-210ENST00000551981 CASKO14936 926 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 CDH16O75309 829 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 TMIGD3P0DMS9 266 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 CYP4B1P13584 511 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 CD1DP15813 335 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 BMP7P18075 431 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 EPORP19235 508 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 IVDP26440 423 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 GALNSP34059 522 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 FBXW4P57775 412 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 E2F2Q14209 437 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 OR4D1Q15615 310 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 Q5PR19 223 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 DEPDC1Q5TB30 811 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 C18orf63Q68DL7 685 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 ZCCHC7Q8N3Z6 543 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 OR7G3Q8NG95 312 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 SPPL2AQ8TCT8 520 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 DOK4Q8TEW6 326 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 EXT2Q93063 718 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 ABTB1Q969K4 478 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 NTNG2Q96CW9 530 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 ZFP3Q96NJ6 502 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 GNRHR2Q96P88 292 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 SFXN3Q9BWM7 321 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 SORBS1Q9BX66 1292 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 ANGPTL4Q9BY76 406 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 OR51B5Q9H339 312 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 WDR41Q9HAD4 459 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 LYARQ9NX58 379 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 TEX10Q9NXF1 929 aaPredicted RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 TXNDC16Q9P2K2 825 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 RNF112Q9ULX5 631 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
CHMP1A-210ENST00000551981 EXPH5Q8NEV8 1989 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 SH3D21A4FU49 640 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 WISP3O95389 354 aaPredicted RBP12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ACTL6AO96019 429 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 NR2F6P10588 404 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 STMN1P16949 149 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ARFIP1P53367 373 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 PCDH1Q08174 1060 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 PDIA2Q13087 525 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 SETDB1Q15047 1291 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 BICRALQ6AI39 1079 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 TMEM64Q6YI46 380 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 LRRC8AQ8IWT6 810 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ZNF441Q8N8Z8 693 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 C9orf106Q8NAJ2 232 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 TMEM41AQ96HV5 264 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 TM9SF2Q99805 663 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 MCMBPQ9BTE3 642 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ACBD3Q9H3P7 528 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 CAB39LQ9H9S4 337 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 GALNT8Q9NY28 637 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 OPTCQ9UBM4 332 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 MTO1Q9Y2Z2 717 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-210ENST00000551981 ZANQ9Y493 2812 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 ARID1AO14497 2285 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 PLPP1O14494 284 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 SMPD2O60906 423 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 PRKRAO75569 313 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 LY6G6DO95868 133 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 CLPSP04118 112 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 SLC35E2BP0CK96 405 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 SLC35E2P0CK97 266 aa12.95□□□□□ -0.34
CHMP1A-210ENST00000551981 KRT15P19012 456 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms