RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	CCDC71	Q8IV32	467 aa	Predicted RBP	10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	SLC5A8	Q8N695	610 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	SETD9	Q8NE22	299 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	OR4D11	Q8NGI4	311 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	OR9A2	Q8NGT5	310 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	BBS10	Q8TAM1	723 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	CNIH3	Q8TBE1	160 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	OTUB1	Q96FW1	271 aa	Predicted RBP	10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	PIP5K1A	Q99755	562 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	YIPF4	Q9BSR8	244 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	ADNP	Q9H2P0	1102 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	BCL2L10	Q9HD36	194 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	ACER3	Q9NUN7	267 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	RLIM	Q9NVW2	624 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	HRASLS2	Q9NWW9	162 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	KCND3	Q9UK17	655 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	POMT2	Q9UKY4	750 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	NDRG4	Q9ULP0	352 aa	Known RBP	10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	DAPP1	Q9UN19	280 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	MRPS17	Q9Y2R5	130 aa	Known RBP	10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	SH3GLB1	Q9Y371	365 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	NAALAD2	Q9Y3Q0	740 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	GMPPB	Q9Y5P6	360 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	HSPE1-MOB4	S4R3N1	261 aa		10.84	□□□□□ -0.67
RAB5C-208	ENST00000551338	NUP210L	Q5VU65	1888 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	URAD	A6NGE7	173 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF860	A6NHJ4	632 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338		A8MVJ9	347 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	B3GALT2	O43825	422 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	KIF1C	O43896	1103 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	EPPIN	O95925	133 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	CSF2	P04141	144 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	HMGN2	P05204	90 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	CCDC159	P0C7I6	412 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	NR2F1	P10589	423 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	NME1	P15531	152 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ALOX12	P18054	663 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PXN	P49023	591 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	MAN2A2	P49641	1150 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ANXA11	P50995	505 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRKAG1	P54619	331 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	NUP107	P57740	925 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	NPRL3	Q12980	569 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PMS2P3	Q13401	168 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	GANAB	Q14697	944 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	RAB39A	Q14964	217 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	MICA	Q29983	383 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRSS41	Q7RTY9	318 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	COMTD1	Q86VU5	262 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	LACC1	Q8IV20	430 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	RBM12B	Q8IXT5	1001 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	SHISA5	Q8N114	240 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	LRRC25	Q8N386	305 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM46D	Q8NEK8	389 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	NUP43	Q8NFH3	380 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR9Q2	Q8NGE9	314 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR52J3	Q8NH60	311 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	XAGE5	Q8WWM1	108 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	HLA-C	Q95604	372 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ELP4	Q96EB1	424 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	GIMAP5	Q96F15	307 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	C16orf58	Q96GQ5	468 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	COL21A1	Q96P44	957 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	OR7D2	Q96RA2	312 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ZNF607	Q96SK3	696 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	FEV	Q99581	238 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PCED1A	Q9H1Q7	454 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	ANKRA2	Q9H9E1	313 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	POLR1B	Q9H9Y6	1135 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	RSL24D1	Q9UHA3	163 aa	Known RBP	10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	SLC22A7	Q9Y694	548 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	KCNE3	Q9Y6H6	103 aa		10.83	□□□□□ -0.68
RAB5C-208	ENST00000551338	TMEM247	A6NEH6	219 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ARRDC5	A6NEK1	342 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FAM170B	A6NMN3	283 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FFAR1	O14842	300 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PCDH17	O14917	1159 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	HCRTR1	O43613	425 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SEMA7A	O75326	666 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	GADD45G	O95257	159 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ANGPTL1	O95841	491 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ST6GAL1	P15907	406 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	TYRP1	P17643	537 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	CBL	P22681	906 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	MAOB	P27338	520 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	CD38	P28907	300 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PPP2R1B	P30154	601 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	FMO3	P31513	532 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SLC5A2	P31639	672 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	MPI	P34949	423 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SOX18	P35713	384 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	HMGA2	P52926	109 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	CRISP3	P54108	245 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	ESRRG	P62508	458 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	SIM1	P81133	766 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	PRR5	P85299	388 aa		10.82	□□□□□ -0.68
RAB5C-208	ENST00000551338	LSAMP	Q13449	338 aa		10.82	□□□□□ -0.68

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