RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LGI4Q8N135 537 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 HORMAD2Q8N7B1 307 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SUN3Q8TAQ9 357 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-215ENST00000547672 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 XAGE5Q8WWM1 108 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 NR4A3Q92570 626 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 GATA6Q92908 595 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 MAL2Q969L2 176 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 C10orf90Q96M02 699 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 EPYCQ99645 322 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC29A1Q99808 456 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 YTHDF1Q9BYJ9 559 aaKnown RBP12.65□□□□□ -0.38
PTCH1-215ENST00000547672 OR51I1Q9H343 314 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 THSD1Q9NS62 852 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 GIN1Q9NXP7 522 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 C5AR2Q9P296 337 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 PDP2Q9P2J9 529 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 ACSL6Q9UKU0 697 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 RAB23Q9ULC3 237 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SLC6A14Q9UN76 642 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 XIRP2A4UGR9 3374 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.38
PTCH1-215ENST00000547672 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 EML5Q05BV3 1969 aa12.65□□□□□ -0.38
PTCH1-215ENST00000547672 MN1Q10571 1320 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 HMGN4O00479 90 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 CHST10O43529 356 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 PLOD3O60568 738 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 COQ9O75208 318 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 TNFAIP8O95379 198 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 AK1P00568 194 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 SEMG1P04279 462 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 HMGN2P05204 90 aaKnown RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 FPR1P21462 350 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 IFNA8P32881 189 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 GALNSP34059 522 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 OR1D5P58170 312 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 HPCAP84074 193 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 SERTAD2Q14140 314 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 HLA-BQ31612 363 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 NHSL2Q5HYW2 709 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 TNFAIP8L2Q6P589 184 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 MED25Q71SY5 747 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ST13P4Q8IZP2 240 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF555Q8NEP9 628 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF675Q8TD23 568 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 TFAP2CQ92754 450 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 COL26A1Q96A83 441 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 RBM18Q96H35 190 aaKnown RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 TRNT1Q96Q11 434 aaKnown RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ANKRD60Q9BZ19 345 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 EVA1AQ9H8M9 152 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 NTN4Q9HB63 628 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ENOPH1Q9UHY7 261 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 SLC13A4Q9UKG4 626 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 ZNF232Q9UNY5 417 aa12.64□□□□□ -0.39
PTCH1-215ENST00000547672 C19orf53Q9UNZ5 99 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-215ENST00000547672 IGHV5-51A0A0C4DH38 117 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 SGK494L7N484 410 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 EI24O14681 340 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 CASC3O15234 703 aaKnown RBP12.63□□□□□ -0.39
PTCH1-215ENST00000547672 B4GAT1O43505 415 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 HRO43593 1189 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 DYRK3O43781 588 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 OR10H2O60403 315 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 OR2B3O76000 313 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 IFNW1P05000 195 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 CFIP05156 583 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 BCHEP06276 602 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 C8orf89P0DMQ9 161 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 OR12D1P0DN82 309 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 THRBP10828 461 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 RHCEP18577 417 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 CD1CP29017 333 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 AQP1P29972 269 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 CAPGP40121 348 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 DCTP40126 519 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 GTF2A1P52655 376 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-215ENST00000547672 ITGA1P56199 1179 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 HSD17B7P56937 341 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 PPP1CAP62136 330 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 KCNJ10P78508 379 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-215ENST00000547672 ACY1Q03154 408 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 STX4Q12846 297 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 BLMHQ13867 455 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 C16orf72Q14CZ0 275 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 OTUD3Q5T2D3 398 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-215ENST00000547672 CDC73Q6P1J9 531 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 TMEM71Q6P5X7 295 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 TMEM107Q6UX40 140 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 C16orf62Q7Z3J2 963 aa12.63□□□□□ -0.39
PTCH1-215ENST00000547672 BPHLQ86WA6 291 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-215ENST00000547672 OR2L13Q8N349 312 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms