RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 LIPT1Q9Y234 373 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 CARD8Q9Y2G2 431 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 GPR52Q9Y2T5 361 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 FEZF1A0PJY2 475 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 OR2A25A4D2G3 310 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PROM1O43490 865 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SULT1C4O75897 302 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PAK4O96013 591 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 HLA-FP30511 346 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 AQP6Q13520 282 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LEXMQ3ZCV2 418 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 FAM26DQ5JW98 314 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 ALG1LQ6GMV1 187 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 XKRXQ6PP77 449 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 TMC8Q8IU68 726 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 VRK3Q8IV63 474 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 ACBD7Q8N6N7 88 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 CELF5Q8N6W0 485 aaKnown RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SAMD12Q8N8I0 201 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PROKR2Q8NFJ6 384 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 OR2T33Q8NG76 320 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 WDR48Q8TAF3 677 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SUN3Q8TAQ9 357 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.81□□□□□ -1.167e-12■■□□□ 11.8
PRKAB1-207ENST00000542698 SLC22A18Q96BI1 424 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LMLNQ96KR4 655 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LINC00597Q9H2U6 94 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 COMMD9Q9P000 198 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 ACSL5Q9ULC5 683 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PADI2Q9Y2J8 665 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 MED31Q9Y3C7 131 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PCDHGB7Q9Y5F8 929 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC35F4A4IF30 521 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 M0R3H8 397 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 ARHGAP33O14559 1287 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PLD2O14939 933 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 MID1O15344 667 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 B3GALT4O96024 378 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 CAPNS1P04632 268 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 FHP07954 510 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC10A3P09131 477 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 DRD2P14416 443 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 JUNDP17535 347 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PTNP21246 168 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 NUP62P37198 522 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 GUCA1AP43080 201 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 PDGFRLQ15198 375 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 TOR1AIP1Q5JTV8 583 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 RSPO2Q6UXX9 243 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LINGO2Q7L985 606 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 NRARPQ7Z6K4 114 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 TMEM173Q86WV6 379 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 LYSMD2Q8IV50 215 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 REM2Q8IYK8 340 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 NRSN1Q8IZ57 195 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 VWA5B2Q8N398 1253 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 OR52E4Q8NGH9 312 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF431Q8TF32 576 aaPredicted RBP7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 MYNNQ9NPC7 610 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 SLC35C2Q9NQQ7 365 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 MARCH5Q9NX47 278 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 A3GALT2U3KPV4 340 aa7.81□□□□□ -1.16
PRKAB1-207ENST00000542698 TRAV6A0A075B6T7 132 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 C2orf92A0A1B0GVN3 265 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 MEIOCA2RUB1 952 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 METTL15A6NJ78 407 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 GNB5O14775 395 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 TGM5O43548 720 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 RASGRP1O95267 797 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 GASTP01350 101 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 MT-ND5P03915 603 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 RHOP08100 348 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ZDHHC11BP0C7U3 371 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNF3P17036 446 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 PSMA3P25788 255 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ACVR2AP27037 513 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 STOMP27105 288 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 CST5P28325 142 aaPredicted RBP7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ACADLP28330 430 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 GCGRP47871 477 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 GIPRP48546 466 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 WDR5P61964 334 aaKnown RBP7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 PYCR3Q53H96 274 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 LACC1Q8IV20 430 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ASB15Q8WXK1 588 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 PKMYT1Q99640 499 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 NIPSNAP1Q9BPW8 284 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 MMP28Q9H239 520 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 TTYH1Q9H313 450 aaPredicted RBP7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 TCF7L1Q9HCS4 588 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 FBXO8Q9NRD0 319 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ITM2BQ9Y287 266 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 PCDHGA6Q9Y5G7 932 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 ZNFX1Q9P2E3 1918 aaKnown RBP7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 COL11A2P13942 1736 aaPredicted RBP7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 A0A1W2PQ09 198 aa7.8□□□□□ -1.16
PRKAB1-207ENST00000542698 TSPAN9O75954 239 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms