RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 RCOR3Q9P2K3 495 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-214ENST00000540539 FKBPLQ9UIM3 349 aa9.01□□□□□ -0.97
CLIP1-214ENST00000540539 IKZF3Q9UKT9 509 aa9.01□□□□□ -0.97
CLIP1-214ENST00000540539 SLC9A8Q9Y2E8 581 aa9.01□□□□□ -0.97
CLIP1-214ENST00000540539 CHST2Q9Y4C5 530 aa9.01□□□□□ -0.97
CLIP1-214ENST00000540539 KIAA1217Q5T5P2 1943 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 E9PQ18 207 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 LDLRAD4O15165 306 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 SERPINA3P01011 423 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 FOLR2P14207 255 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ELNP15502 786 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CRABP1P29762 137 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RGS19P49795 217 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PPT1P50897 306 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 UFM1P61960 85 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 DHODHQ02127 395 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 GTF2H3Q13889 308 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ST3GAL2Q16842 350 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CDNFQ49AH0 187 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 GCNT6Q5T4J0 391 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RPL13AP3Q6NVV1 102 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 GDPGP1Q6ZNW5 385 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 KCNMB4Q86W47 210 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF548Q8NEK5 533 aaPredicted RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 OR2T11Q8NH01 316 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 GPBAR1Q8TDU6 330 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RXFP2Q8WXD0 754 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 TFAP2BQ92481 460 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 FAM162AQ96A26 154 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 HRASLS5Q96KN8 279 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 FCRL1Q96LA6 429 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF559Q9BR84 538 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 TMPRSS5Q9H3S3 457 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RHOJQ9H4E5 214 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 KCNK12Q9HB15 430 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 SLC6A20Q9NP91 592 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 TAS2R3Q9NYW6 316 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 OR6C2Q9NZP2 312 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PLEKHA6Q9Y2H5 1048 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 HYKKA2RU49 373 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PPIHO43447 177 aaKnown RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 RP2O75695 350 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 LATS1O95835 1130 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 IL1AP01583 271 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ADCYAP1P18509 176 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 UQCRC2P22695 453 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 DDTP30046 118 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CCR9P51686 369 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 JAK3P52333 1124 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RBBP4Q09028 425 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CAMK2GQ13555 558 aaPredicted RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 GRB14Q14449 540 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 KRT33BQ14525 404 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CLINT1Q14677 625 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ATP13A5Q4VNC0 1218 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PYY3Q5JQD4 70 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 LIPKQ5VXJ0 399 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 GPR153Q6NV75 609 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ETV3LQ6ZN32 361 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM135Q86UB9 458 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 MISPQ8IVT2 679 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 OR2L5Q8NG80 312 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 C9orf43Q8TAL5 461 aaPredicted RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 TWIST2Q8WVJ9 160 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 ROBO4Q8WZ75 1007 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 KAT2AQ92830 837 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PKP4Q99569 1192 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 CFHR5Q9BXR6 569 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 XYLT2Q9H1B5 865 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 RNF122Q9H9V4 155 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 PRMT7Q9NVM4 692 aaPredicted RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 PDP1Q9P0J1 537 aaPredicted RBP9□□□□□ -0.97
CLIP1-214ENST00000540539 COMMD3Q9UBI1 195 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 MMACHCQ9Y4U1 282 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 NEUROG3Q9Y4Z2 214 aa9□□□□□ -0.97
CLIP1-214ENST00000540539 SLC16A4O15374 487 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 IL33O95760 270 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SCG5P05408 212 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ATXN1LP0C7T5 689 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 G6PDP11413 515 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 C6P13671 934 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 GABRA1P14867 456 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 PSMA1P25786 263 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 SDC2P34741 201 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CRATP43155 626 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CCR6P51684 374 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 POLR2JP52435 117 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 RAB10P61026 200 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 CLN3Q13286 438 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 FAM187BQ17R55 369 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 C3orf38Q5JPI3 329 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TMEM31Q5JXX7 168 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 TDRD10Q5VZ19 366 aaKnown RBP8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MSANTD2Q6P1R3 559 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 ASB18Q6ZVZ8 466 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 VSIG10LQ86VR7 867 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 NAXDQ8IW45 347 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 MFSD6LQ8IWD5 586 aa8.99□□□□□ -0.97
CLIP1-214ENST00000540539 PXT1Q8NFP0 134 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms