RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 EDN3P14138 238 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 GJA5P36382 358 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 EPHA4P54764 986 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 DSC1Q08554 894 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 TMEM35AQ53FP2 167 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 LIPKQ5VXJ0 399 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ARSKQ6UWY0 536 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 KANSL1Q7Z3B3 1105 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 WDR53Q7Z5U6 358 aaPredicted RBP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 AQP12AQ8IXF9 295 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ZFP41Q8N8Y5 198 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 COQ8AQ8NI60 647 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ELP5Q8TE02 316 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 FOXJ1Q92949 421 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 XYLT2Q9H1B5 865 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 EPHA6Q9UF33 1036 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 VSTM2BA6NLU5 285 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 H3BNX3 289 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SLC6A4P31645 630 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ERV3-1Q14264 604 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 C6orf132Q5T0Z8 1188 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 KIAA0319Q5VV43 1072 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 LRRTM3Q86VH5 581 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 KLHDC8AQ8IYD2 350 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SLC44A3Q8N4M1 653 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 EID2Q8N6I1 236 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ACOT12Q8WYK0 555 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 OR5B2Q96R09 309 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 MAN2C1Q9NTJ4 1040 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ACAD8Q9UKU7 415 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 BHMG1C9JSJ3 638 aaPredicted RBP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SCAMP2O15127 329 aaKnown RBP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 S1PR4O95977 384 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 TUBG1P23258 451 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 C3orf38Q5JPI3 329 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 THAP6Q8TBB0 222 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ABLIM1O14639 778 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 PGCP20142 388 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 HOXA11P31270 313 aaPredicted RBP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SPINT3P49223 89 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ROR2Q01974 943 aaKnown RBP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 LARP4Q71RC2 724 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ZER1Q7Z7L7 766 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 NPWQ8N729 165 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SCGB3A2Q96PL1 93 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 DPAGT1Q9H3H5 408 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 OR5K4A6NMS3 321 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 ZNF850A8MQ14 1090 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 PROS1P07225 676 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 MAGEA2P43356 314 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SLC36A3Q495N2 470 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 NANOGP8Q6NSW7 305 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 NIPAL1Q6NVV3 410 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 C6orf120Q7Z4R8 191 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 VTCN1Q7Z7D3 282 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 LHFPL3Q86UP9 236 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 TOR1AIP2Q8NFQ8 470 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 SHISA4Q96DD7 197 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 APOOQ9BUR5 198 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 NANOGQ9H9S0 305 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 POLE4Q9NR33 117 aa10.69□□□□□ -0.7
LINC00346-201ENST00000538077 LDB3O75112 727 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 KIAA1614Q5VZ46 1190 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 CES4AQ5XG92 561 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 OR9A2Q8NGT5 310 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 RAB2BQ8WUD1 216 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 OR10A4Q9H209 315 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 RXFP3Q9NSD7 469 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 RAD51DO75771 328 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 F10P00742 488 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 FGF3P11487 239 aaPredicted RBP10.68□□□□□ -0.7
LINC00346-201ENST00000538077 GTF2F2P13984 249 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 MYOGP15173 224 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 HNRNPA2B1P22626 353 aaKnown RBP10.68□□□□□ -0.7
LINC00346-201ENST00000538077 CD97P48960 835 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 ARSDP51689 593 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
LINC00346-201ENST00000538077 GRK1Q15835 563 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 UNC50Q53HI1 259 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 ABHD17BQ5VST6 288 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 KIAA0895LQ68EN5 471 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 FOXN4Q96NZ1 517 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 NUDT15Q9NV35 164 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 ISPDA4D126 451 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 PTGESO14684 152 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 WNT7BP56706 349 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 NPRL3Q12980 569 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 CDNFQ49AH0 187 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 C17orf99Q6UX52 265 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 TMEFF1Q8IYR6 380 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 SLC37A3Q8NCC5 494 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 LSM14AQ8ND56 463 aaKnown RBP10.68□□□□□ -0.7
LINC00346-201ENST00000538077 TBC1D15Q8TC07 691 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
LINC00346-201ENST00000538077 HERPUD2Q9BSE4 406 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms