RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 CASRP41180 1078 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 MLF1P58340 268 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 RNF4P78317 190 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 FUT7Q11130 342 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 TLR1Q15399 786 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 RGS9BPQ6ZS82 235 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 SLC29A4Q7RTT9 530 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 BEST3Q8N1M1 668 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 VWA5B2Q8N398 1253 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 HORMAD2Q8N7B1 307 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 RBMXL3Q8N7X1 1067 aaKnown RBP18.43■□□□□ 0.54
CHEK1-215ENST00000533778 SUN3Q8TAQ9 357 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 NUBPLQ8TB37 319 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 GFM2Q969S9 779 aaKnown RBP18.43■□□□□ 0.54
CHEK1-215ENST00000533778 PNPLA2Q96AD5 504 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 ERP27Q96DN0 273 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 UTP23Q9BRU9 249 aaKnown RBP18.43■□□□□ 0.54
CHEK1-215ENST00000533778 BRINP2Q9C0B6 783 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 EXO1Q9UQ84 846 aaKnown RBP18.43■□□□□ 0.54
CHEK1-215ENST00000533778 ATMQ13315 3056 aa18.43■□□□□ 0.54
CHEK1-215ENST00000533778 OR5H15A6NDH6 313 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 MYO1GB0I1T2 1018 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 DYNC1I1O14576 645 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 AKAP10O43572 662 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 BCAS2O75934 225 aaPredicted RBP18.42■□□□□ 0.54
CHEK1-215ENST00000533778 LRATO95237 230 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 WDPCPO95876 746 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 PRPS1L1P21108 318 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 C19orf57Q0VDD7 668 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 PRICKLE4Q2TBC4 344 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 OGFOD2Q6N063 350 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 FAM180BQ6P0A1 224 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 Q6ZS92 163 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 LARP4Q71RC2 724 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHEK1-215ENST00000533778 SPATA19Q7Z5L4 167 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 ZNF843Q8N446 348 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 NATD1Q8N6N6 113 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 ZNF321PQ8N8H1 164 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 CLHC1Q8NHS4 586 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 ZNF675Q8TD23 568 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 MFRPQ9BY79 579 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 ATAD3AQ9NVI7 634 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 PLA2G3Q9NZ20 509 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 SH3BP4Q9P0V3 963 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 MYOTQ9UBF9 498 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 CFL2Q9Y281 166 aa18.42■□□□□ 0.54
CHEK1-215ENST00000533778 YARS2Q9Y2Z4 477 aaKnown RBP18.42■□□□□ 0.54
CHEK1-215ENST00000533778 GABRR3A8MPY1 467 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 B8ZZF3 427 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 HRKO00198 91 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 SDHDO14521 159 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 TGDSO95455 350 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 PRB1P04280 392 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 G6PDP11413 515 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 NCBP2P52298 156 aaKnown RBP eCLIP18.41■□□□□ 0.545e-13■■■■□ 23.9
CHEK1-215ENST00000533778 SLC37A1P57057 533 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 PDE7AQ13946 482 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 NADK2Q4G0N4 442 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 ZFP28Q8NHY6 868 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 THAP3Q8WTV1 239 aaPredicted RBP18.41■□□□□ 0.54
CHEK1-215ENST00000533778 NPAS2Q99743 824 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.41■□□□□ 0.54
CHEK1-215ENST00000533778 OR10A5Q9H207 317 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 SLCO1B3Q9NPD5 702 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 SLAMF7Q9NQ25 335 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 MAT2BQ9NZL9 334 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 ATP6V1HQ9UI12 483 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 USH1CQ9Y6N9 552 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 MED13Q9UHV7 2174 aa18.41■□□□□ 0.54
CHEK1-215ENST00000533778 FAM208BQ5VWN6 2430 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 TRAV17A0A0B4J275 112 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 SCAMP2O15127 329 aaKnown RBP18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ITGA10O75578 1167 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 CT62P0C5K7 136 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 SSTR4P31391 388 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 TRHRP34981 398 aaPredicted RBP18.4■□□□□ 0.54
CHEK1-215ENST00000533778 CD97P48960 835 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 CYB561P49447 251 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 TNFSF10P50591 281 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 CLDN8P56748 225 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 OC90Q02509 493 aaPredicted RBP18.4■□□□□ 0.54
CHEK1-215ENST00000533778 PTGR1Q14914 329 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 MPEG1Q2M385 716 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ZNF628Q5EBL2 1059 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 HLA-DQA1Q5Y7H0 255 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 SLC6A19Q695T7 634 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 GPALPP1Q8IXQ4 340 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 TMEM156Q8N614 296 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ADCY4Q8NFM4 1077 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 OR9A2Q8NGT5 310 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ACTRT2Q8TDY3 377 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 DOK4Q8TEW6 326 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 CTHRC1Q96CG8 243 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ZBED6CLQ96FA7 236 aaPredicted RBP18.4■□□□□ 0.54
CHEK1-215ENST00000533778 WDR55Q9H6Y2 383 aaPredicted RBP18.4■□□□□ 0.54
CHEK1-215ENST00000533778 PRODH2Q9UF12 536 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 BCAP29Q9UHQ4 241 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ZNF639Q9UID6 485 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 IGSF10Q6WRI0 2623 aa18.4■□□□□ 0.54
CHEK1-215ENST00000533778 ZFYVE26Q68DK2 2539 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms